Pseudomonas aeruginosa RP73: M062_00015
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Entry
M062_00015 CDS
T02711
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
prp
Pseudomonas aeruginosa RP73
Brite
KEGG Orthology (KO) [BR:
prp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prp03032
]
M062_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
prp03400
]
M062_00015 (gyrB)
Enzymes [BR:
prp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
M062_00015 (gyrB)
DNA replication proteins [BR:
prp03032
]
Prokaryotic type
DNA Topoisomerases
M062_00015 (gyrB)
DNA repair and recombination proteins [BR:
prp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M062_00015 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGO37988
LinkDB
All DBs
Position
4275..6695
Genome browser
AA seq
806 aa
AA seq
DB search
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE
ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN
IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV
FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE
AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK
RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS
RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH
LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA
FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALAVSNLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacaacacgtacgactcttccagcatcaaggtgctgaaggggctggatgcc
gtacgcaagcgccccggcatgtacatcggcgacaccgacgatggcaccggtctgcaccac
atggtgttcgaggtggtggataactccatcgacgaagcgctggccggttactgcagcgaa
atcagcatcaccatccatacggatgagtcgatcactgtccgcgacaatggacgcggtatt
ccggtggatatccacaaggaagaaggggtttctgcggcggaagtgatcatgaccgtcctc
cacgccggcggcaagttcgacgacaacacctacaaggtgtccggcggcttgcacggtgtg
ggcgtctcggtggtgaacgcgctgtcccatgaactacgcctgaccatccgtcgccacaac
aaggtctgggaacaggtctaccaccacggcgttccgcagttcccactgcgcgaagtgggc
gagaccgatggctccggtaccgaagttcacttcaagccgtccccggagaccttcagcaac
atccacttcagttgggacatcctggccaagcgcatccgcgagctgtccttcctcaactcc
ggcgtcggcatcctgctgcgcgacgagcgtaccggcaaggaggagctgttcaagtacgaa
ggcggtctgaaggccttcgtcgagtacctgaacaccaacaagaccgcggtgaacgaggta
ttccacttcaacgtccagcgtgaagaggacggcgtgggtgtggaagtcgccttgcagtgg
aacgacagcttcaacgagaacctgctctgcttcaccaacaacatcccgcagcgtgatggc
ggcacccacctggccggtttccgttcggcgctgacgcgtaacctgaacaactacatcgag
gccgaaggcctggcgaagaaattcaagatcgccaccaccggcgacgatgcccgcgaaggc
ctcaccgcgatcatctcggtgaaggtaccggacccgaagttcagctcgcagaccaaggac
aagctggtctcctccgaggtgaagactgcggtggaacaggagatgggcaagtacttcgcc
gacttcctgctggagaatcccaacgaagccaaggccgtggtcggcaagatgatcgacgcc
gcccgtgcccgcgaggccgcgcgcaaggcgcgcgagatgacccgccgcaagggcgcgctg
gacatcgccggcctgcccggcaaactggccgattgccaggaaaaggacccggcgctctcc
gaactgtacatcgtggagggtgactccgcgggcggttccgccaagcagggccgcaatcgc
cggacccaggcgatcctgccgctcaagggcaagatcctcaacgtcgaaaaggcgcgcttc
gacaagatgctctcctcccaggaggtcggtacgctgatcaccgccctgggctgtggcatc
ggccgcgaggaatacaacatcgacaagctgcgctaccacaacatcatcatcatgaccgat
gctgacgtcgacggttcgcacatccgcaccctgctgttgaccttcttcttccgccagatg
cccgagctgatcgagcgtggctacatctacatcgcccagcccccgttgtacaaggtcaag
cgcggcaagcaggagcagtacatcaaggacgaccaggccatggaagagtacatgacccag
tcggccctggaagacgccagcctgcacgtcaacgagcacgctccgggcctgtccggggcg
gcgctggagaaactggtcaacgagtatcgcggggtgatcgccaccctcaagcgcctgtcg
cgcctgtacccccaggagctgaccgagcacttcatctacctgcctaccgtgtcggtggac
gacctggctaacgagtcggccatgcagggctggttggagaagttccaggcgcgcctgacc
gccgccgagaagtccggcctgacctacaaggccagcctgcgcgaagaccgcgagcgccac
ctgtggctgcccgaggtggaactggtggcccacggcctgtccagctacgtcaccttcaac
cgtgacttcttcgccagcaatgactaccgctcggtgtcactgctcggcgaccagctgaac
agcctgctggaagacggcgcctacgtgcagaagggtgagcgcaagcgcccgatcagcgcc
ttcaaggacggcctggactggctgatggccgaaggtaccaagcgccacagcatccagcga
tacaaggggctgggcgagatgaaccctgagcagctgtgggaaaccaccatggatccgaac
gtccggcgcatgctcaaggtgaccatcgaggacgccatcgccgccgaccagatcttcaac
accctgatgggcgatgccgtggagccgcgccgcgacttcatcgaaagcaacgcgctggcg
gtgtcgaacctggacgtgtga
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