Pseudomonas aeruginosa RP73: M062_11200
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Entry
M062_11200 CDS
T02711
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
prp
Pseudomonas aeruginosa RP73
Pathway
prp00500
Starch and sucrose metabolism
prp01100
Metabolic pathways
prp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
prp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
M062_11200
Enzymes [BR:
prp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
M062_11200
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
AGO39872
LinkDB
All DBs
Position
complement(2395840..2397990)
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AA seq
716 aa
AA seq
DB search
MSRKRSPAPSRISEGHPFPLGATWDGLGVNFALFSAHATKVELCLFDARGEKEIERIELP
EYTDEIWHGYLPDAHPGQIYGYRVHGPYEPDAGHRFNPNKLLLDPYAKQLVGRLRWSEAL
FGYTIGSADADLSFDERDSAPFVPKSKVIDPAFTWAERPPVRVPWDRTVIYEAHLRGLSM
RHPQVPEAVRGTFAGLMNADLLAHIRRLGVTSVELLPIHGFVDDKHLLENGMSNYWGYNS
IAFFAPHPAYLASGQVNEFKEMVAHLHDAGLELILDVVYNHTAEGNELGPTLCMRGIDNA
SYYRLMPDQRRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMRVDGFRFDLATILGR
HPDGFDERHGFLVACRQDPVLSKCKLIAEPWDCGPGGYQVGGFPPGWAEWNDRFRDCVRA
YWRGDDGMLPELARRLTASGDLYDQRGRRPYASVNFVTAHDGFTLRDVVSYDHKHNEANG
ENNADGSDHNLSWNHGCEGPTDDPEIRALRLRQMRNLLSTLLLSQGTPMLVAGDEFSRTQ
QGNNNVYCQDNELGWIDWRLDDEGRSLLAFTQRLLALRQRYPILRRGRFLVGEYNEALGV
KDVTWLAPGGEEMTEEHWHDEHARCLGVLLDGRAQPTGILRSGEDATLLLILNAYHDAVS
FRLPEVAEGSGWTCLLDTQRPEDPLGERYPFASEFLVGGRSFLLFELQPPGAGAEG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagcgtagccccgctccttcgcggatcagcgaagggcaccccttccccctt
ggcgccacctgggacggcctcggcgtcaatttcgcgctgttctcggcccacgcgaccaag
gtcgagctgtgcctgttcgacgcgcgcggggaaaaggagatcgagcgcatcgaattgccc
gagtacaccgacgagatctggcacggctacctgcccgacgcccacccggggcagatctac
ggctaccgggtgcacggtccctacgagccggatgccggccaccgcttcaatcccaacaaa
ttgctcctcgatccctacgccaagcagttggttggccgcctgcgctggtccgaggcgctg
ttcggctacaccatcggctcggccgacgccgacctcagcttcgacgagcgcgacagcgcg
cccttcgtgcccaagtcgaaggtcatcgatccggccttcacctgggccgagcgcccgccg
gtacgcgtcccctgggaccgcacggtgatctacgaagcccacctgcgcggcctcagcatg
cgccatccacaggtcccggaggcggttcgcgggaccttcgccgggctgatgaacgccgac
ctgctggcgcacatccgccggctcggggtgaccagcgtcgagctgctgccgatccacggc
ttcgtcgacgacaagcacctgctggaaaacggcatgagcaactactggggctacaacagc
atcgccttcttcgccccgcacccggcctacctcgccagcggccaggtcaacgagttcaag
gagatggtcgcgcacctccacgacgccggactggagctgatcctcgacgtggtctacaac
cacaccgcggaaggcaacgagctgggtccgaccctgtgcatgcgtggcatcgacaacgcc
tcgtactaccgcctgatgcccgaccagcgccgctactacatcaacgattccggcaccggc
aacaccctcgacctcagccacccctgcgtgttgcagatggtcaccgactcgctgcgctac
tgggccacggagatgcgcgtggacggcttccgcttcgacctggcgaccatcctcggccgc
catccggacggtttcgacgagcgccacggcttcctcgtcgcctgccgccaggacccggtg
ctgagcaagtgcaagctgatcgccgaaccctgggattgcggccccggcggctaccaggta
ggcggcttcccgcccggctgggcggaatggaacgaccgtttccgcgattgcgtgcgcgcc
tactggcgcggcgacgacggcatgctgccggaactggcgcggcgcctaaccgcctccggc
gatctctacgaccagcgtggacggcggccctacgcgtcggtgaacttcgtcaccgcccac
gacggcttcaccctgcgcgacgtggtttcctacgatcacaagcacaacgaggccaacggc
gagaacaacgccgacggcagcgaccacaacctgtcctggaaccacggctgcgagggcccc
accgacgacccggagatccgcgccctgcgcctgcgccagatgcgcaacctgctgtccacc
ctgctgctgtcccagggcaccccgatgctggtcgccggcgacgagttcagccgcacccag
cagggcaacaacaatgtctattgccaggacaacgaactgggctggatcgactggcggctg
gacgacgagggccgttcgctgctggccttcacccagcgcctgctggccctgcgccaacgc
tatccgatcctgcgcagggggcgcttcctggtcggcgagtacaacgaggcgctgggtgtc
aaggacgtcacctggctggcgcccggcggcgaggagatgaccgaggaacactggcacgac
gagcacgcccgctgtctcggcgtgctcctcgatggccgcgcgcaacccaccgggatcctg
cgcagcggtgaggatgccaccctgctgctgatcctcaatgcctaccacgacgcggtgtcc
ttccgtcttcccgaggtggccgagggcagcggctggacctgcctgctggatacccaacgg
ccggaggacccgctcggcgaacgctacccgttcgccagcgagttcctggtcggcggccgc
agtttcctgctgttcgagctacaaccgccgggcgccggagcggaaggatga
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