Pseudomonas aeruginosa RP73: M062_22595
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Entry
M062_22595 CDS
T02711
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
prp
Pseudomonas aeruginosa RP73
Pathway
prp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M062_22595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prp03400
]
M062_22595
Enzymes [BR:
prp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M062_22595
DNA repair and recombination proteins [BR:
prp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M062_22595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGO41794
LinkDB
All DBs
Position
complement(4866899..4870636)
Genome browser
AA seq
1245 aa
AA seq
DB search
MSQQQMPVALDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLDHGGENAFGRPLSPPE
ILVVTFTDAATQELRERIRSRLGEAARCFAEPQERHDGLLVALRQQYPAERWPGCARLLR
LAAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGL
TAPAAQAVASCYSGPEALGKALQPLLARQDADFRYADQALSAPESLTALLEQGGDWYRQL
DQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRGKDSDETFDAWLQALADWSEGGEQP
ANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAHQEERPDLAPHLLLHALGEVGHELEIE
KQRRAEIGFDDLLSRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYR
IAADPDEPQARETGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGKNFRSTAAM
VAAANRCFAFAEEHPRGAFRFAREGLENPVPFHAVDAQGRAERLLIDGAEAPAMTFWNLD
VEAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAGFADEQGGWRALRPADIAILVRGRA
EAEAIRSALAARRLASVYLSDRDSVFDSQEAIDLLHWLRACADPGADTLLRVALATRSLH
LDWATLERLNQDELFWERMVLRFRDYRRSWQAQGVLPMLRRLLADFELPARLLRHADGER
SLTNLLHLAEWLQRAAVELDGEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSK
GLEYPLVLLPFICSWRELDGNSGAPASFHEDGAAGRVIELARRKEQAARAYEQANDERLG
EDMRLLYVALTRARHSVWLGIAPLVASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAA
LRGECREIVVEPAPEADAERYVAGRGQGLGQARETRRSSREKWWVASYSGLQLQASAGLD
DDEVLESDESQEPISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPRGPAPGTFLHGLL
EWAGREGFEVARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLA
GLVAYQVEMEFWFATHQVQAEAIDALVRRHTLGGAARPALAPTLLNGMFKGFVDLVFEHQ
GRFYVADYKSNWLGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDR
HMGGAVYLFLRGARAATQGLHFERPPRELIERLDALFSGQPGAER
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagcagatgcccgtggccctcgatccgctggacttcccgttgcacggcagc
cgcctgatcgaggccagcgccggtaccggcaagacgttcaccatcgccctgctatacgta
cgcctggtcctcgaccatggcggcgagaacgctttcggccggccgctgagcccgccggaa
atcctcgtggtgaccttcaccgatgcggcgacccaggaactccgcgagcgtatccgcagc
cgcctgggcgaagcggcgcgttgtttcgccgagccgcaggagcgccacgacggcctgctg
gtcgcgttgcgccagcagtatcccgccgagcgctggccgggctgcgcgcgcctgctgcgc
ctggccgcggagtggatggacgaggccgcggtatcgaccatccacagttggtgctaccgg
atgctgcgcgagcacgccttcgacagcggcagcctgttcacccagaacctggaaaccgac
cagagcgaattgctcgccgaagtggtgcgggactactggcggcgtaacttctacggcctg
acggctccggcggcgcaagccgtggccagttgctacagcgggccggaggcgctgggcaag
gccttgcagccgctgctggcgcggcaggacgccgacttccgctacgccgaccaggcgctg
agtgcgcccgagtcactgacagccttgctggagcagggcggcgactggtatcgccagctc
gaccaactggacgcgcaggcccgcgccgcctggcgcgcagcgcgcgtcgaactggaagcg
ctgctgcgcgacctgcgtccctacctgaacggcaacagctatcgcggcaaggacagcgac
gagaccttcgacgcctggctgcaagcgttggcggactggagcgagggcggcgagcagccg
gccaacctcggcaagttcggccagacccggatcaagctcaccgccaagcgcgtggcgccc
gagcatgccgcgctaagggccatcgacgcctgggccgcgcatcaggaagagcgtcccgat
ctcgctccccacctgttgttgcacgcgttgggcgaagtcgggcacgaactggagatcgag
aagcagcggcgtgccgagatcggcttcgacgacctgctcagccgcctcgaccgcgccttg
caggggcctggtggcgagcgcctggcgcaattgatccgcgagcagttcccggtggcgctg
atcgacgagttccaggataccgacccggtgcagtaccggatcttcgagcgcatctaccgg
atcgccgccgatcccgacgagccccaggcgcgggaaaccggcctgttcatgatcggcgac
cccaagcaggcgatctacgccttccgcggtgccgacatccatacctacctgcgcgcccgc
gaggccactcgcgggcggcattacacccttggcaagaacttccgctcgaccgccgccatg
gtggcggccgccaaccgctgcttcgccttcgccgaagagcatccgcgcggcgccttccgt
ttcgcccgcgaggggctggaaaacccggtgccgttccatgcggtggacgcccaggggcgc
gccgaacgtttgttgatcgacggtgccgaggcgccagcgatgacgttctggaaccttgat
gtcgaagccggcgtgctcggctccgcggcgtatcgccaggaaatggccgagcgcagcgcc
agcgccatccgccgctggctgagcctggccgacctgggccgcgccggcttcgccgacgag
cagggcggctggcgggcgttgcgcccggcggatattgccatcctcgtccgcggtcgcgcc
gaggccgaggcgatccgcagcgcgttggcggcgcgacgactggccagcgtctacctgtcc
gaccgcgactcggtgttcgacagccaggaggccatcgacctgctgcactggctgcgcgcc
tgcgccgaccccggtgccgatacgctgctgcgggtcgccctggctacccgcagcctgcac
ctggactgggcgaccctggaacgattgaaccaggacgaactgttctgggaacggatggtc
ctgcgcttccgcgactatcgccggtcctggcaggcccagggcgtattgccgatgctgcgg
cgcctgctcgccgacttcgaactgccggcgcgcctgctgcggcatgccgatggcgagcgc
agcctgaccaacctgctgcacctggccgagtggctgcagcgcgcggcggtggagctggac
ggtgagcacgcgctgatccgccatctggccgagcaggtgcagagtccggggagcgaagag
atcctccgcctggaaagcgacgccgacctgatcaaggtggtgaccatccacaagtccaag
gggctggaataccccttggtgctgctgcccttcatctgcagctggagggagctggacggc
aacagcggcgcgccggcgagtttccacgaggatggcgctgcagggcgggtcatcgagctg
gcgcggcgcaaggagcaggctgcgcgggcctacgagcaggccaacgacgagcgcctcggc
gaagacatgcgcctgctctacgtggccctgacccgcgcccgccattcggtgtggctgggc
atcgcgccgctggtggcgagcaacagcaagtcgccggagttgcacaagggggccctgggc
tacctgcttgccggcggcgcgaccatcggcagcgatggcctcggacaatgcctcgccgcg
ttgcgcggcgagtgccgggagattgtcgtcgagccggcccccgaggcggacgccgaacgc
tatgtcgctgggcgcggccagggccttgggcaggcccgcgaaacccgccgcagcagccgc
gagaagtggtgggtcgccagctattccggcctgcaattgcaggcctccgccgggctggac
gatgacgaggtgttggagagcgacgaatcgcaggagccgatcagcgccgaggaagccacc
ttccacgaagaaggccgttccgccgaacagccgccggtcgcgcacgccagcgagatgcgc
gacgacctgcatcgcttcccgcgcggaccggctcccggcaccttcctccacgggctgctc
gaatgggccggccgcgaaggcttcgaggtggcgcgcgccgatgcccagcggcgccgcgaa
ctggtcgcgcgacgctgcgatctgcgtggctggaaggactgggccgaaccgctcgacctg
tggctggagcagtatctcgccgaaccgctgcgctggcccggtggcgaaaccagcctggcc
gggctggtcgcctaccaggtggaaatggagttctggttcgccacccaccaggtccaggcc
gaggcgatcgacgccctggtccggcgccataccctcggcggcgcggcgcgtccggcgctg
gcgccgaccctgctgaacggcatgttcaagggcttcgtcgacctggtcttcgagcaccag
gggcgtttctacgtggccgactacaagtccaactggctgggcgccgacgacggcgcctac
agcccggaagcgatgaccgccgcggtgctggagaaccgttatgacctgcagtacgtgttg
tacctgctggccctgcaccggcagttgaaggcgcgcctgcccgactacgactacgaccgc
cacatgggcggcgccgtgtacctgttccttcgcggcgcccgcgcggcgacccagggcctg
cacttcgagcgcccgccgcgggaactgatcgaacgcctggacgcgctgttcagcggccag
ccgggagccgagcgatga
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