Pseudomonas aeruginosa RP73: M062_22600
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Entry
M062_22600 CDS
T02711
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
prp
Pseudomonas aeruginosa RP73
Pathway
prp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M062_22600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prp03400
]
M062_22600
Enzymes [BR:
prp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M062_22600
DNA repair and recombination proteins [BR:
prp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M062_22600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGO41795
LinkDB
All DBs
Position
complement(4870633..4874148)
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AA seq
1171 aa
AA seq
DB search
MPEPLGTTALTPGFMIVHGNRLDDLRDLAVSWMRRYPLAPLESERVLVHSNGIAQWLKLA
LAEDPREDGGGGGGIAAALEVQLPAQFLWQAYRAVLGRESIPEVSELDKAPLTWRLMRLL
PGLLERPEFRTLQRFLADDADLRKRHQLAERLADLFDQYQVYRGDWLDDWSQGRDQLRTA
NGQARPLGADERWQAELWRALLADVGADSLARSRSGVHRRFIEALRSASAAPRALPRRVV
VFGISSMPAQTLEALAALARFSQVLLCVHNPCRHHWADIVADKDLLRHEYRRQQRRAGVP
ADLDEDRQHQHAQPLLAAWGKQGRDYINLLDSYDDPDSYRNLFGEVNGGRIDLFSEEAPH
GLLGQLQDDILELRPLAETREHWPPVAPRSDASIRFHVAHSAQREVEILHDQLLARFNAD
PSLKPRDVIVMVPDINAYAPHIEAVFGQVPRDDQRFIPYTLADQGQRGREPLLIALEHLL
KLPDSRFAVSEILDLLDVPALRRRFGVDEADLATLHRWIEGAGVRWGLDAAQRERLGLPA
GLEGNSWRFGLRRMLLGYAVGEGAALQGIQPYDEVGGLDAALAGPLAVLLERLEVAYAEL
AEPATPAQWGERLQALLTVFFEAHDERDELLLTQLLQLLERWQEHCACAAFAEPLPISVI
REAWLGGLDQGGLNQRFLAGAVSFCTLMPMRAIPFRLVCLLGMNDGDYPRQQSPLDFDLM
RNDYRPGDRSRREDDRYLLLEALLSAREQLYVSWVGRSIRDNGERPPSVLIGQLRDHLAA
GWRLDPDGDGEALLRALTQEHPLQPFSRRYFHDAPEQGVDGLFTYAREWREVHSEDDIAV
PDAEAPLPPLELEGALGLRALAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALD
NWKLQFELTERMKRWVERDWDAEGLPAQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLP
DLLWRYRQEIERWPEAVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHE
GRGFKWHSLVRHWLQHLALQRLGQPVSSVLVSQTGTLEIPPLPSERAGEYLDQLIDAWRQ
GMRQPLPVACRTAFAWLASGGAAEPEKAMREARKRYEGGFGMGGEVDASPALARVYPDFD
RLLASGEFAHWAEQLYAPLLAALGRGAEEQA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccttgggaaccaccgccctcacgcccggattcatgatcgtccacggcaat
cgcctggacgacctgcgcgacctcgccgtttcctggatgcgccgctatccgctggcgccg
ctggaaagcgagcgggtcctggtgcacagcaacggcatcgcccaatggttgaagctggca
ttggccgaagatccccgcgaggacggcggcggcggtggcggcatcgccgcggcgctggag
gtgcagttgccggcgcagttcctctggcaggcctatcgcgcggtgctgggccgcgaaagc
attcccgaggtttccgaactggacaaggcgccgctgacctggcgcctgatgcgtctgctt
cccggattgctggagcgtcccgagttccgcaccctgcaacgtttcctcgccgacgatgcc
gacctgcgcaagcgtcatcaactggccgagcgcctggccgacctgttcgaccagtaccag
gtctatcgcggcgactggctcgacgactggagccagggccgcgaccagttgcgcacggcg
aacgggcaggcgcgcccgctcggtgccgacgagcgctggcaggccgaattgtggcgcgcg
ctgctcgccgacgtcggtgccgatagcctggcccgcagccgctccggcgtgcaccggcgc
ttcatcgaggcgctgcgctccgccagcgcggcgccgcgcgcgttgccgcgacgagtggtg
gtgttcgggatttcctcgatgccggcgcagaccctcgaggcgctggccgccctggccagg
ttcagccaggtgctgctctgcgtgcacaacccctgtcgccaccactgggccgacatcgtc
gccgacaaggacctgttgcgccacgagtaccgccgccagcagcgccgcgccggcgtcccc
gccgacctcgacgaggaccgccagcaccagcatgcccagccgttgctggcggcctggggc
aagcagggccgcgactacatcaacctgctcgacagctacgacgacccggacagctatcgg
aacctgttcggcgaggtcaacggcgggcgcatcgacctgttcagcgaggaggccccgcac
gggctgctcggccagttgcaggacgatatcctcgaactgcgcccgttggcggaaacccgc
gagcactggccgccggtggcgccgcggagcgacgcctcgatccgcttccatgtggcccac
agcgcgcagcgcgaagtggagatcctccacgaccagttgctcgcccgcttcaacgccgat
ccgagcctgaagccgcgcgacgtgatcgtcatggtccccgacatcaacgcctacgcgccg
cacatcgaggcggtgttcggccaggtgccgcgcgacgaccagcgcttcattccctatacc
ctggccgaccagggacaacgcggtcgcgagccgctgctgatcgccctggagcacctgctg
aaactgcccgacagccgtttcgccgtgagcgagatcctcgacctgctggacgtcccggca
ttgcgccggcgtttcggcgtcgacgaggccgacctggcgaccctgcaccgctggatcgaa
ggcgccggcgtgcgctgggggctggatgccgcgcagcgcgagcgtctcggcctgccagcg
ggactggagggcaacagttggcgcttcggtctgcggcgcatgctgctcggctacgcggtc
ggcgaaggcgcggccctgcaaggcatccagccctacgatgaggtcggtggtctggacgcc
gccctggcaggcccgctggctgtgctgctggagcgcctcgaggtggcctacgccgagctg
gccgaaccggccaccccggcgcagtggggcgagcgcctgcaagccctgctcacggtgttc
ttcgaggcccacgacgagcgcgacgaactgctcctcacccagctcctgcaattgctcgag
cgctggcaggaacactgcgcttgtgcggccttcgccgagccgctaccgatcagcgtgata
cgcgaggcctggctcggcggcctggaccagggcggcctgaaccagcgcttcctggctggc
gcggtgagtttctgcacgttgatgccgatgcgcgcgatcccgttccggctggtctgcctg
cttggcatgaacgatggcgactacccccgccagcagtcgccgctggatttcgacttgatg
cgcaacgactaccgccccggcgaccgctcgcggcgcgaggacgaccgctacctgctgctc
gaggcgctgctctcggcgcgcgagcagctctacgtgagctgggtggggcggagtatccgc
gacaatggcgagcggccgccctcggtgctgatcggccagttgcgcgatcacctggcggcc
ggctggcgtctggacccggacggcgacggcgaggcgctgctgcgtgccctgacccaggag
catccgctgcagccgttcagccgtcggtattttcacgatgcgccggagcagggcgtcgat
ggcctgttcacctacgcccgcgagtggcgcgaggtccatagcgaggacgacatcgccgtt
cccgacgccgaagcgcccctgccgccgcttgaactggagggcgcactggggctgcgagcg
ctggcggagttcctcgccaacccggtgaatgcgttcttccagcagcggctcaaggtgcgt
ttcgacgacgagcaattgaccggcaacgacgaagagcctttcgaactggacgcgctggac
aactggaagctgcaattcgagctgaccgaacgcatgaagcgctgggtcgagcgggactgg
gatgccgagggcctgccggcgcagttgcaggcccaggtcgagcgactgcggcgacagggt
cgcctgccgctggcggcgttcggcgagttctccgcgcgccatttgctgcaaccgctgccc
gacctgctctggcgctaccgccaggaaatcgagcgctggccggaggcggtcgagcagcag
caggagttgcgccatcgccatccgtccgggctggagctggaggactggctcggcggcttg
cgtcgcgacgcttccgggcgcctggcgcgcctgcagttgctcagcggcaagctccatgaa
gggcgcggcttcaagtggcacagcctggtgcgccactggttgcagcacctcgccctgcaa
cgtctaggccagccggtgagcagcgtgctggtgagccagaccggcaccctggagattccg
ccgctgccgagcgagcgcgccggcgagtacctcgaccagttgatcgacgcctggcgccag
ggcatgcgccagccgttgccggtggcctgccggaccgctttcgcctggctcgccagtggt
ggcgccgcagagcccgagaaagccatgcgcgaggcgcgcaagcgctacgagggagggttc
ggcatggggggcgaggtggacgcctcgccggcgctggctcgggtctatccggacttcgac
cggctgctcgccagcggtgagttcgcgcactgggccgagcagctctacgcgccgctgctg
gctgccctgggacgtggcgcggaggagcaggcatga
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