Pseudomonas aeruginosa RP73: M062_27810
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Entry
M062_27810 CDS
T02711
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
prp
Pseudomonas aeruginosa RP73
Pathway
prp00300
Lysine biosynthesis
prp00470
D-Amino acid metabolism
prp01100
Metabolic pathways
prp01110
Biosynthesis of secondary metabolites
prp01120
Microbial metabolism in diverse environments
prp01230
Biosynthesis of amino acids
Module
prp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M062_27810
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M062_27810
Enzymes [BR:
prp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
M062_27810
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGO42737
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Position
6017925..6019172
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AA seq
415 aa
AA seq
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MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH
CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA
VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL
GVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcagttaccgcgacggtgagctgttcgcggaaggggtggcgctttcccgc
atcgccgagcgtttcggcacgcccacctacgtctattcccgcgcacacatcgaggcccag
taccgcgcctatgccgatgccctcgccggcatgccgcatctggtctgcttcgcggtcaag
gccaactccaacctcggggtgctgaatgtgctggcgcgcctcggcgccggtttcgacatc
gtttcccgcggtgagctggagcgtgtcctggccgccggcggcgatccggccaaggtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacgtcgagtccggcgaagagctggagcgcctgcaacgggtagctgcggaactc
ggcgtgaaagcgccggtatcgctgcgggtcaacccggacgtggacgcccagacccacccc
tatatctccaccggcctgaaagagaacaagttcggcatcgccatcgacgaggccgaggcg
gtctacgcccgcgccgccgagcttgaccacctggaggtgatcggcgtcgactgccacatc
ggctcgcagttgacccagctggagcccttcctcgacgccctcgagcgcctgctcgggctg
gtcgaccgcctggccggcaaaggcatcggcattcgccacctggacctcggtggtggcctc
ggggtgcgctaccgcgacgaacagccgccgctggccggcgactacatccgcgccatccgc
gagcgcctgcacggccgcgacctgaccctggtgttcgagccgggccggtccatcgtcgcc
aacgccggcgtgctgctgacccgtgtcgagtaccttaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggctctctaccaggcctggatg
gacgtgcaggcggtacgcccgcgcgacgccgcgccgcgccgctacgacctggtcgggccg
atctgcgagaccggtgacttcctcgccaaggatcgcgacctggcgctcgccgaaggcgac
ctactggcggtgcgctcggccggcgcctacggcttcgtcatgagctcgaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgagcagacccacgaggtccgtcgccgc
gagaccgtccaagagctctacgccggcgaaagcctgctgccgcagtga
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