Providencia huaxiensis: CYG50_04910
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Entry
CYG50_04910 CDS
T05654
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
prq
Providencia huaxiensis
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prq03032
]
CYG50_04910 (topA)
03400 DNA repair and recombination proteins [BR:
prq03400
]
CYG50_04910 (topA)
Enzymes [BR:
prq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYG50_04910 (topA)
DNA replication proteins [BR:
prq03032
]
Prokaryotic type
DNA Topoisomerases
CYG50_04910 (topA)
DNA repair and recombination proteins [BR:
prq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYG50_04910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_TFIIB
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXH61418
UniProt:
A0A345LTH8
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Position
complement(1627443..1630049)
Genome browser
AA seq
868 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGSGYVVKSSVGHIRDLPKSGSGSQTGSQKSTGSSTDKTK
KVKKDPRDALVKRMGIDPYQGWKANYQILPGKEKVVSELKSLAEDADHIYLATDLDREGE
AIAWHLREVIGGDDTRFSRVVFNEITKNAITQAFDSPGELNIDRVNAQQARRFMDRVVGY
MVSPLLWKKVARGLSAGRVQSVAVKLIVEREREIKAFVPEEYWELHADLADKDVANLRME
VTSQGGKAFKPVNKAQTEAAVKLLEKARFSVVDREDRPTSSKPSAPYITSTLQQAASTRL
GFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDALDMVRGYINDNFGAKYLPKDANVYSS
KDNSQEAHEAIRPSSVDVLPESLKDMENDAKRLYQLIWNQFVACQMTPAKYDSTTLTVKA
GDFELKAKGRTLRFDGWTKVMPALRKNDEDKTLPPIQVGVELSLTELLPSQHFTKPPARF
SEASLVKELEKRGIGRPSTYAAIISTIQDRGYVKVENRRFYAEKMGEIVTDRLEENFNDL
MNYDFTARMEDQLDHVANHDAEWKAVLDEFFSDFSKQLNVAEKEPEEGGMRTNPMVITSI
ICPDCERHMGIRTASTGVFLGCSGYALPPKERCKKTINLIPEDEVLNVLEGDDAETNALR
AKRRCPKCGTAMDSYLIDNGRKLHVCGNNPACEGYEIEEGEFRIKGYDGPVIECDKCGSE
MHLKMGRFGKYMGCTNEECKNTRKILRSGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAA
GVFLAANTFPKSRETRAPLVAELQRFKDRLPEKLAYLAEAPAEDGEGNPTVVRFSRKTKQ
QYVSSEKNGKATGWSAFYVDGKWEVKEK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgttatagtggagtccccggcaaaggccaaaacgattaataagtat
cttggcagtggctacgttgtaaaaagcagcgttggccacattcgtgatctgccgaaaagc
ggctctggttcacaaaccggctcacaaaagagtacaggctcatctaccgacaaaacaaag
aaagtaaaaaaagatccgcgtgacgcattagttaagcgtatggggattgacccttaccag
ggttggaaagcgaattatcaaattctacctggtaaagaaaaagtagtttctgaacttaaa
tcactggcggaggatgctgatcacatctacctcgcaacggacttggaccgcgaaggggaa
gccattgcgtggcatttacgcgaagtgataggtggagatgatactcgttttagtcgagtt
gtatttaatgaaattacgaagaatgcgatcactcaggcatttgatagtcctggggaatta
aacatagatagagttaacgcacaacaagcgcgtcgttttatggaccgagttgtgggttac
atggtttctccactgttgtggaaaaaagtggctcgaggcttatctgctggtcgtgtccaa
tccgttgcagtgaaactcattgttgaacgtgaaagggaaattaaagccttcgttcctgaa
gaatattgggaactgcatgccgatttagcggataaagatgtcgctaacttgcgtatggaa
gtcacttcacaaggtggtaaggcatttaaaccggtcaataaagcgcaaacagaagcagcg
gttaagctccttgagaaagcgcgtttttcggttgttgaccgtgaagataggccgacgtca
agcaagccgagcgcaccgtatatcacgtcaacgctacaacaagccgccagcacccgttta
ggttttggcgtgaaaaaaaccatgatgatggctcagcgcctttatgaagctgggtacatc
acctatatgcgtactgactcaacaaacttgagccaagatgcactcgacatggttcgtggt
tatattaatgataattttggcgcgaaatacctgccaaaagacgcgaatgtttatagtagt
aaagataattcgcaagaggcgcacgaagccattcgtccttcgagtgtcgatgttttacct
gaatcactaaaagacatggagaacgacgcgaaaaggttgtatcaattgatttggaatcaa
tttgtggcgtgtcaaatgacacctgcgaaatatgattcaacaaccttaacggtcaaagca
ggggattttgaactaaaagccaaagggcgtactctgcgctttgatggttggacgaaagtc
atgcctgcattgcgtaaaaatgatgaagataaaacattaccgccaatacaagttggtgtg
gaattgtcattaactgagttattgcctagccagcactttaccaagccgccagcacgtttt
agtgaagcatctttggttaaagagctagaaaaacgcggtattggtcgtccttcaacgtat
gcagcgattatttcgacgatccaagatagaggttatgtcaaagttgaaaatcgtcgtttc
tatgcagagaaaatgggtgaaatcgtaaccgatcgattagaggaaaactttaacgacctg
atgaactacgattttactgcgcgtatggaagaccaacttgaccacgttgctaatcatgat
gccgaatggaaagcggtgttagatgaattcttctctgacttcagtaagcagctaaacgtt
gctgaaaaagaaccggaagaaggtggaatgcgcaccaatccaatggtgatcacttcaatc
atttgccctgattgtgaacgccatatgggtattcgtaccgcgtcaaccggggtattttta
ggttgttctggttacgctttaccaccaaaagaacgttgtaaaaaaacaatcaaccttatc
cctgaagatgaagtcttaaatgtgcttgaaggggatgatgcggaaactaatgcgttaaga
gcaaaacgtcgttgtccaaaatgtggcaccgcgatggacagctatttgattgataatggc
cgtaaattacatgtctgtggtaataacccggcatgtgaaggctatgaaatcgaagaaggc
gaattccgtattaagggttacgatggcccagtcattgaatgtgacaagtgtggttcggaa
atgcacctgaaaatggggcgttttggtaagtacatggggtgtaccaacgaagagtgtaaa
aatacgcgtaaaattttacgaagtggtgaagtcgcaccaccgaaagaagatccggttcca
ttaccggaacttccatgtgaaaagtccgatgcgtattttgtgttacgtgatggcgcagct
ggggttttccttgcggcaaatacattccctaaatcacgggaaacacgtgcaccattagtt
gcagaattacaacgctttaaagaccgtttacctgaaaaacttgcttatttggcggaagca
ccagctgaagatggcgaaggtaacccaactgtcgtccgttttagccgtaaaacgaagcaa
caatatgtttcttcagaaaaaaatggcaaagcaacgggttggagtgcgttttacgttgac
ggtaaatgggaagtgaaagagaaataa
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