Providencia huaxiensis: CYG50_09345
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Entry
CYG50_09345 CDS
T05654
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
prq
Providencia huaxiensis
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prq01002
]
CYG50_09345 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prq01011
]
CYG50_09345 (ldtD)
Peptidases and inhibitors [BR:
prq01002
]
Cysteine peptidases
Family C82
CYG50_09345 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
prq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CYG50_09345 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4979
Motif
Other DBs
NCBI-ProteinID:
AXH62199
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All DBs
Position
745437..747188
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AA seq
583 aa
AA seq
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MAKRRVRALQVSVICGLMALQFPAFSNEENTQQSVSEVQTIASLTPTESLVKITQSLPAD
VKPIFSTQLAKLYADRQMQLLWQDETAISQFQQQLAELSLSGVQPQFGEWLAILENNQLN
ELGRDVILSDAMLGYLQYLSSIEASGQYWLYTNRPYKIIAPTAAQMKPWIDAVESNNLSG
WVKSQAPSHPMYLPMRKEMLKLLAIPEDNLEIVGTKTLKPGQSSDDVVILRQILQREGLL
EGGNVTEDIAPPETMAQVAELATEQTAESTGTLDAPASSVSKVYDQELVDAVKKFQLQYG
LEADGVVGKGTRVWLNMQPKQKAGLMALNIQRLRIIPASSGTGILVNIPGYSLDFYLNDE
VILDSKVIVGRADRKTPIMSSALNNVVINPPWSVPTSMARKDIAPRGKQDPSYFSRKGYT
VYSGWGADSYEINPYAIDWDNITPANFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTP
NHSLFNRNARAISSGCVRVNKASELASILLGDAGWEQKRIDGALKEGSTRYVNIPDRIPV
FLYYQTAWVDKDQQPQYRADIYQYDNSINNADKYLPILKKILH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaagagtgagagctctgcaagtctcggtaatatgcgggttgatggcgtta
cagtttcccgcattctcaaatgaagaaaatacgcagcaaagtgtttctgaagttcaaacg
atagcttcgttaacacctacagaaagtttagtcaaaataacacagtcgcttcctgcggat
gtgaaacctattttttctacgcaattagcaaaattatacgctgataggcaaatgcagtta
ttgtggcaagatgaaacggcaattagccaatttcagcaacaactggcagaattatccctt
tctggagttcagcctcaatttggggagtggctagcgatactggaaaataaccagttaaat
gagctaggccgtgacgttattttatctgatgccatgcttggctatttacagtatttatct
tcgatagaagcgagtgggcaatattggttatacaccaatcggccttataaaattattgct
ccaacggccgctcaaatgaaaccatggatagatgccgtcgagtctaataatttaagtggc
tgggttaaatcgcaagccccgagtcacccaatgtatttgccaatgcgcaaagaaatgttg
aaattattggcgatcccggaagataacctggaaattgtggggacgaaaacattaaagcca
gggcagtctagcgatgatgtggttattttgcgtcaaatcttgcaacgtgaagggttactt
gaaggtggaaatgtaaccgaagacatcgcacctcctgaaacaatggctcaagttgcagaa
ctggcaactgaacaaaccgctgaatcgacaggaacacttgatgcacctgcgagctccgtg
tcgaaagtatatgatcaagaactcgtcgatgcggtaaaaaaattccaattgcaatatggc
ttagaagcagacggtgttgttggaaaaggcacgcgtgtttggttaaacatgcagcctaag
cagaaagcaggtttaatggcactcaatattcaacgcttacgtattataccagcaagtagt
gggacagggattttagttaatattcctggctactctttagatttctatttaaatgacgaa
gtgattttagactctaaagtgattgttggccgtgctgatcgcaaaacaccgatcatgagc
agtgcgctaaataacgtagtcattaacccgccttggagtgtgccgaccagtatggcacgt
aaagatattgctccaagaggaaaacaagatccaagttattttagccgcaaagggtatacg
gtttattcaggttggggagccgactcatatgaaatcaacccatatgctattgattgggat
aatatcaccccagctaattttccatatcgcattcgacaggcaccgggcccgactaactca
ttagggcgctataagtttaatatgccgagttcagatgcgatttatttacacgatacacca
aaccatagtttatttaatcgcaatgcgcgtgcaataagctctggatgtgtgcgagtgaat
aaggcaagtgagttagccagtattttattaggtgatgcaggttgggaacaaaaacgcatt
gatggtgcgttgaaagaggggtcaacacggtatgtgaatatacccgataggatcccagtt
tttctgtactatcaaactgcttgggtagataaagaccagcaaccacaatatcgagccgat
atttatcagtatgataattcgattaataatgcagataaatatttgccaatattgaaaaag
attttacactaa
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