Providencia huaxiensis: CYG50_17450
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Entry
CYG50_17450 CDS
T05654
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prq
Providencia huaxiensis
Pathway
prq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CYG50_17450 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prq03021
]
CYG50_17450 (rpoA)
03400 DNA repair and recombination proteins [BR:
prq03400
]
CYG50_17450 (rpoA)
Enzymes [BR:
prq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CYG50_17450 (rpoA)
Transcription machinery [BR:
prq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CYG50_17450 (rpoA)
DNA repair and recombination proteins [BR:
prq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CYG50_17450 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AXH63660
UniProt:
A0A345LZX0
LinkDB
All DBs
Position
complement(3556114..3557103)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVKVQGKDEVILTLNKSGIGPVTAADIIHDGD
VEIVKPQHIICHLTDESASINMRIKVQRGRGYVPASARVHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgctaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aacgcactgcgccgtattctgctttcgtctatgccgggttgtgcggtgacagaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggtgtacaggaagatatcctggag
attctcctcaacctgaaagggctggcggtaaaagttcaggggaaagatgaagttatttta
accttgaataaatctggcattggccctgtgactgcagccgacatcatccatgatggtgat
gtcgaaatcgtcaagccacagcacatcatctgccaccttactgacgaaagcgcatctatt
aatatgcgaattaaagtacagcgtggtcgtggttatgtgccggcttctgcccgagttcat
tcggaagaagatgagcgcccaatcggtcgtttgttagtcgatgcttgctacagcccagta
gagcgtattgcctacaatgttgaagcagctcgtgttgagcaacgtacagacttggataag
ttagttattgaaatggaaactaacggtacaatcgatcctgaagaggcgattcgccgtgcg
gcaaccattctggctgaacaacttgaagcttttgttgacttacgtgatgttcgtcagcct
gaagttaaagaagagaaaccagaattcgatcctatcttattgcgcccagttgacgatctg
gaattgactgtccgctctgctaactgcctcaaagcagaagctatccactacatcggtgat
ctggtacagcgtacagaagttgagttgctcaaaactccgaaccttggtaagaaatctctt
actgaaattaaggacgtcttggcatctcgtggtctttctctgggcatgcgtctagaaaat
tggccaccagcaagtattgctgatgattaa
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