Providencia huaxiensis: CYG50_17630
Help
Entry
CYG50_17630 CDS
T05654
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
prq
Providencia huaxiensis
Pathway
prq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYG50_17630 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prq03021
]
CYG50_17630 (rho)
03019 Messenger RNA biogenesis [BR:
prq03019
]
CYG50_17630 (rho)
Transcription machinery [BR:
prq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CYG50_17630 (rho)
Messenger RNA biogenesis [BR:
prq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYG50_17630 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AXH63687
UniProt:
A0A345LZZ7
LinkDB
All DBs
Position
complement(3519412..3520671)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANRRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLISKLAMTKTNEEFFDFMKRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtatcagaattgattacgttaggcgaaaac
atggggctagagaacttagcccgtatgagaaagcaggatattattttctctattttgaag
cagcatgcgaaaagtggcgaagatattttcggcgatggcgtactggaaatattgcaggat
ggatttggtttcctccgttcagcagacagttcttacctcgcaggtcctgatgatatctac
gtttctcctagccaaatccgccgttttaacttacgtacaggtgacacaatttcaggaaaa
attcgtcctcctaaagaaggtgaacgttattttgccctcctaaaagtcaacgaagttaac
tacgacaaacctgaaaatgcccgcagtaaaattcttttcgaaaacctaactccattgcat
gcaaaccgtcgtctgcgtatggaacgtggtaacggttcaactgaagatttaactgcacgt
gtactggatcttgcggcgccaatcggtcgtggccaacgtggtctgattgttgctccaccg
aaagcgggtaaaacaatgttgctgcaaaacattgcagcaaatattgcacacaattatcct
gattgcgttctgatggttctgttgatcgatgaacgtcctgaggaagtgacagaaatgcag
cgtttagttaaaggtgaagtaatcgcttcaactttcgatgagcctgcagcacgtcacgtt
caagtcgctgagatggtgattgagaaagcgaaacgtctagttgaacataaaaaagacgtt
atcattttactcgactctattacgcgtctggcccgtgcatacaacaccgttgtaccttcc
tctgggaaagtattaaccggtggtgtggatgctaacgcattacaccgtccaaaacgtttc
ttcggtgctgctcgtaatgttgaagaaggtggaagcctgacaatcattgcaactgcactg
gttgataccggttctaagatggatgaagttatttacgaagagtttaaaggtacaggtaac
atggaactgcacctgtctcgtaagattgcagaaaaacgtgttttccctgcaatagactac
aaccgttctggtacgcgtaaagaagagttactgacatcgcaagatgagttacaaaaaatg
tggatcctgcgtaagatcattcacccaatgggcgaaatcgatgcaatggagttcctcatc
agtaaattagcgatgacgaaaactaacgaagagttctttgattttatgaaaagagcgtaa
DBGET
integrated database retrieval system
