Providencia huaxiensis: CYG50_20620
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Entry
CYG50_20620 CDS
T05654
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
prq
Providencia huaxiensis
Pathway
prq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CYG50_20620 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prq03400
]
CYG50_20620 (recB)
Enzymes [BR:
prq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CYG50_20620 (recB)
DNA repair and recombination proteins [BR:
prq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYG50_20620 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXH64241
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All DBs
Position
complement(2881577..2885185)
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AA seq
1202 aa
AA seq
DB search
MNKVQVESQLLNVFSLPLCGQRLIEASAGTGKTYTIGILYLRLLLGLGGVNAFPRPLSVE
EILVVTFTEAATNELRGRIRQRIHDMRLVCLRNGVGFESQPEYLELLAELSGESQRKFAA
QWLQAAERQMDEAAIYTIHGFCQRMLVHNAFESGVLFEQTMIQDESPIQKQACADFWRRH
FYPLNYSMTKVIQSLWNSPEALLSEIKPFLQGDIPLIINQPKQVETLEERHQRLILLIES
VKTAWLENSADFEKLIAESDVDKRSYSTRFLPAWLIKIGEWAQEETEDYLLPKDLERFSQ
TVLHKKSKSGSGPEHVVFQRIDELLSQSLTLKDLIIPLAISEVRSAISFEKHNRGEMGFD
DLLTRLDSALAQESGKFLAQAISQRFPVAMIDEFQDTDAQQYRIFQRIYREVNDSALLFI
GDPKQAIYAFRGADIFTYIEAKNEVSAHYTLETNYRSSQNMVEAINHLFSHCQSPFIFEQ
IPFQPVNFAKQNSGRKLIHNGEEVNALTFWKMEEEGVSVAEYEQATASQCAVQIAQYLQG
GLQGSSYFDNKGTHTPVEASDITVLVRSRREAVLIRDALNRLNIPSVFQSNRESVFSTSE
ARDLLWLLQAVLTPEKERVLRSALATGILGLTAKQIDDLNHDERSWEKIVDEFARYAVVW
QKRGVLPMLRMVMAQRQIAETLLSGTNGERRLMDVMHIGELLQEMSLQLEGEHTLIRWLA
QQIAHPDHQSDAQQMRLESDKHLVQISTIHKSKGLEYKIVWLPFASNFLPQSKGLYHDRT
DYGVRLDLNDSEENVALADEERLAEDLRLLYVALTRAIYHCSVGIAPLIKGNRKKSGETD
LHLSALGYVIQKGQAGDYQLLNEMLAEISNDVIDVAVINQPKSERVLLEQNDRVNLSARA
VTRHFNDHWRVTSYSGLSYGSSHTEAEESVSALQFANSLSPNMDIEASVDVEQQEDESLT
LTPHQFPKGASPGTFLHSLMEEIDFSEPVSQEWLAEKLESSGFDLQWAPMLQEWLHAIVH
APLSEDGLCLSALRPQDQLDEMQFYLPIESMLSAGHLDKITHQYDPLSQRCPPLSFEKVQ
GILKGFIDLTFYWKGKFYLLDYKSNYLGEDASFYTQEAMAEAMIDHRYDLQYQLYSLALH
RYLKQRMPNYDYETHFGGVYYLFLRGVDDVNSSNGIFFYRPIEAFIEALDSLFKNVQQGE
PA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagtgcaggtagagtcccaattactgaatgttttttcattgcctctgtgtgga
cagcggttaattgaagcatctgcaggaacgggtaaaacatacacaattggtatactttat
ctgcggcttttactaggtttgggaggcgttaatgcgtttcctaggccgttaagtgttgaa
gagattttagttgtgacatttactgaggctgcgacgaatgagttacggggacgtattcgt
caacgtattcatgacatgcgcttagtttgcttaagaaatggtgttggtttcgagtcgcag
cctgagtaccttgaattattagccgagctttcgggggagtcccaaagaaaattcgctgcg
caatggttacaggcagcggaaaggcaaatggatgaagccgcgatatatactatccatggt
ttttgccaaagaatgctagttcataatgcatttgagtcgggagtattgttcgaacaaaca
atgattcaagatgaatctccgattcaaaaacaagcctgtgcagacttttggcgccgtcat
ttttatcctctgaattactccatgacaaaagttattcagtcactgtggaatagtcccgaa
gcattgctttcggagattaaacctttcttacagggtgatattcctttaattattaaccaa
ccgaaacaagtagaaactctagaagaacggcatcagcggctaatcttgttaattgagtca
gttaaaacggcatggttagaaaattcagcggattttgagaagctcatcgctgagtcagat
gttgataaacgaagttatagtactcgttttctacccgcatggttgataaaaattggcgaa
tgggctcaagaagaaacagaagattatctgctgcctaaagatcttgaacgcttctcacaa
acggtactacataaaaaatcaaaaagtggctcagggccagagcatgttgttttccaaaga
atagatgagctactttctcaatcattaaccctaaaagatctaattattccactggcaatt
tcagaggtgaggtcagcgattagttttgaaaaacataaccgtggtgaaatgggatttgat
gatttattgacccgtttagatagtgctcttgctcaagagagtggaaagtttttagctcaa
gctatcagccaacgttttcccgttgcgatgatagatgaatttcaagacacggatgcacag
cagtatcgtattttccaaagaatttatcgagaagttaatgacagcgcattactttttatt
ggcgaccctaaacaagctatttatgcttttcgaggcgctgacattttcacttacattgaa
gcaaaaaatgaagttagcgctcactatacattagagactaattatcgctcatcacaaaat
atggttgaagctattaatcatctatttagccattgtcagtcaccttttatttttgaacaa
attccttttcaacccgttaatttcgctaagcaaaatagcggtagaaaacttatccataat
ggtgaagaagtcaacgcgcttacattttggaaaatggaagaagaaggtgtctccgttgct
gaatatgagcaagcaacagcttcacaatgtgcagtacaaatcgcacaatacttgcaaggt
ggcttgcaaggtagtagctattttgacaataaaggaacgcatactcctgtcgaagcttcg
gatattactgtgttggtgcgcagtcggcgcgaagccgtattaattcgtgatgctttaaat
cggttaaatatcccttcggtgtttcaatctaatcgggagagtgtattttcaacgtcagaa
gctagggatttattgtggttactacaggcagttttaacacctgaaaaagaacgtgttttg
cgcagtgcattggcgacaggaatattgggtttaaccgctaaacaaattgatgacctaaac
catgatgaaaggtcgtgggaaaaaattgtagatgaatttgctcgttatgccgtggtgtgg
caaaaacgaggcgtgctccccatgcttagaatggtcatggcgcagaggcaaattgcagaa
acattattatcaggcaccaacggagagcgtcgcttgatggatgtgatgcatattggtgaa
ttactgcaagaaatgtcattacaacttgaaggtgagcacacactaatccgttggttagcg
caacaaatagcccatcctgatcatcaatctgacgcacagcaaatgcgtcttgaaagtgat
aaacatttggtgcagatcagtaccatacataaatctaaaggccttgaatacaaaattgta
tggctgccttttgcgagcaattttttacctcaatctaaaggcttatatcacgacagaaca
gattatggggtacggctagatttaaatgatagcgaagaaaatgtcgctttagctgacgaa
gaacgcttggcagaagacctacgtttattatatgtggcactcacaagggctatttatcac
tgtagtgtcggtattgcaccattaattaaaggtaacaggaaaaaaagtggtgaaaccgat
ttacacttatctgcattgggttacgttatccaaaaagggcaagctggtgattaccaactc
ttaaacgagatgttggctgaaattagcaatgacgttattgatgttgcagtgattaatcaa
cctaagtcggaacgcgtattattagaacaaaatgatcgtgtaaacttatccgcaagagca
gtgactcgtcattttaatgaccactggcgtgttactagctattcggggttaagttacggt
tcaagccatactgaagcagaagaatcagtttcagcattgcaatttgcgaattcattatcc
ccgaatatggatattgaggctagtgttgatgtagagcagcaggaagacgagtctttgacc
ctaactcctcatcaatttcctaaaggtgcgtcaccaggaacatttttacatagcttaatg
gaagagattgattttagtgaaccagtttctcaagaatggttggctgaaaaacttgaatcc
tcagggttcgacttacagtgggcaccaatgctgcaagaatggctacacgcaattgtacat
gcaccactatcagaagacgggttatgtttatctgctttacggcctcaagaccaattagat
gagatgcagttttatctgcctattgagtcaatgttgagtgcaggccatttagataaaata
acacatcaatatgatccattatcacaacgttgtcctccactaagttttgagaaggttcag
ggaattttaaaagggtttattgacctcaccttttactggaaaggtaaattttacctcctt
gattataagtcaaattatctaggggaagacgctagcttttatactcaagaagcgatggct
gaagcgatgatagaccaccgctatgatttgcagtatcaactatattcgttggcgttacat
cgttacctaaagcaaagaatgcctaattatgattatgaaacccattttgggggtgtctat
tatttatttctaaggggggtagatgatgttaactccagtaacggtattttcttttatcgc
cctatagaagcgtttattgaagcgttagatagcttatttaaaaatgttcaacaaggggaa
cccgcttaa
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