Providencia huaxiensis: CYG50_20830
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Entry
CYG50_20830 CDS
T05654
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prq
Providencia huaxiensis
Pathway
prq03030
DNA replication
prq03430
Mismatch repair
prq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYG50_20830 (dnaE)
03430 Mismatch repair
CYG50_20830 (dnaE)
03440 Homologous recombination
CYG50_20830 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prq03032
]
CYG50_20830 (dnaE)
03400 DNA repair and recombination proteins [BR:
prq03400
]
CYG50_20830 (dnaE)
Enzymes [BR:
prq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYG50_20830 (dnaE)
DNA replication proteins [BR:
prq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYG50_20830 (dnaE)
DNA repair and recombination proteins [BR:
prq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYG50_20830 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
AXH64278
LinkDB
All DBs
Position
complement(2837010..2840492)
Genome browser
AA seq
1160 aa
AA seq
DB search
MASPRFIHLRVHSDYSMIDGLAKTGPLVKKVASMGMPAFAITDFTNLCGLVRFYGAAHGA
GIKPIIGADFYVESELLGDEISHLTVLARNNEGYQNLTLLISEAYQKGYGAVGPTIKREW
LAKHKDGLILLSGGRKGDVGQLLLRGNQALVDECLAFYETHFPDSYYLELVRTGRPDEES
YLHAAVELATKKGLPVVATNDVCFIESSDFDAHEIRVAIHDGFTLADPKRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTIRLGEYFLPQFPTGDMKTEDFLVMRSKEGL
EERLEFLFPDEKVRAEKRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKNLEPIDIAAIPLHDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGSIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIVEARQQGGIFKEIFDLCARVDIKKINRRVMEKLIMAGAFDRLGPHRAALMS
SLEDALKAADQHAKAEAIGQADMFGVLAEAPEQVESSYASVPKWPEQVVLDGERETLGLY
LTGHPITRYLSEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHMLEKDNILIATGQVSFDDFNGGNKMTVRELMDISEAREKY
ARGLAISLSDKQINDQLLNRLRSTLEPHRSGTIPVHLYYQKDDARAKLKFGVVWRVTPVD
PLLNDLRTLLGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacctcgttttattcatttacgcgtccacagtgactattccatgattgatggg
ctagccaaaacggggccactggttaaaaaagtggcttcgatgggcatgcctgcatttgcg
atcaccgattttactaacctttgtgggttagtccggttttatggtgcagcgcatggggcg
gggatcaagccaattattggtgctgatttttatgtggaaagtgaattattaggtgatgaa
atatctcacttaactgttttggcacgtaataatgaaggttatcaaaaccttaccctactg
atttctgaagcatatcaaaaaggttatggtgcagttgggccaaccataaaacgtgaatgg
ttagccaagcataaagacggcttgattctactgtccggtggtcgtaaaggggatgtcggg
caattgctattaagggggaatcaagccttagtggatgagtgccttgcattctatgaaacc
cattttccagatagctactatttagaattggttagaacagggcggcctgatgaagaaagt
tatctacatgcggctgtcgagttagcgactaaaaaaggcctacctgtcgttgcaacgaat
gatgtttgtttcattgaaagtagtgattttgacgctcatgaaatacgtgttgctattcat
gatggttttacattagccgatcccaaaaggcctaaaaattatagccctcagcaatattta
cgttccgaagaagagatgtgtgagctgtttgctgacatccctgaagcgctagaaaacagt
gtagaaattgctaagcgttgtaatgtgacgatccgtttaggtgaatacttcttacctcaa
ttcccgacaggggatatgaaaacagaagactttttagttatgcgctctaaagaagggctc
gaagagcgtttagaatttctgtttcctgatgaaaaagtcagggcagaaaaacgtcctgag
tacgatgaacgtttagagatcgaactcaacgtaatcaaccaaatgggtttccccggctac
ttcttgatcgttatggagtttatccaatggtcgaaggataatggcgtacccgttgggcca
ggaagaggctccggggcgggttcccttgttgcttatgcattaaaaattaccgaccttgac
ccactggaatttgatttactgtttgagcgtttcttgaatcctgagcgtgtttccatgcct
gactttgacgtcgatttctgcatggaaaaacgagaccaagtgattgatcacgtggctcaa
atgtatggccgtgaggcagtttctcaaatcattacctttggtacgatggcggcaaaagcg
gtgatccgagatgttggtcgtgtactcgggcacccatatggttttgtggatagaatttcg
aaattagtgccgccagatcccggtatgacactggaaaaagcgttcgaagcagaacctcag
ctccctgaaatttatgaggctgatgaagaggttaaagcgcttatcgatatggcgcgtaaa
ctcgaaggtgtcacacgaaatgccggtaaacatgcgggtggtgtggttatcgcgccaact
aaaattacggactttgccccactgtattgcgatgcggaaggcaataaccccgtcacacaa
ttcgataaaaacgatgttgagtatgcagggttagttaagtttgacttcctcggcttacgg
acgttgacgattattaactgggcgttggaaatgatcaacgcgcgtcgcgctaagaaaaac
ttagagccgattgatattgctgctattccgctacacgatcaaaaaagttttgatatgctg
cagcgctcagaaaccacagcagtattccagttagaatcacgaggaatgaaggacttaatt
aagcgattacgtcctgactgcttcgaggatatgatcgcactggtagcattgttccgtcca
gggccactgcagtcaggcatggtagataactttattgaccgtaagcatggtcgtgaagaa
atatcgtacccagatgtacaatggcaacatgaatcattaaaacctgttctagagcccaca
tatggtattattttataccaagaacaggttatgcagattgctcaggttttagccggatac
acgcttggcggtgcagatatgctgcgtcgtgcgatggggaaaaagaaacctgaagagatg
gccaaacaacggtctgtttttgaagagggatcaatcaaaaacggggttgatggcgagcta
tcgatgaaaatctttgacttggtagagaaatttgccggttatgggtttaacaaatctcac
tcagcagcatatgcattagtttcataccaaacactgtggctcaaagcccactatcccgct
gaatttatggctgcagtcatgaccgcagatatggataacaccgaaaaagtggtcggttta
gttgatgaatgttggcgaatgggcttaaaagtattgccgccagatatcaatagtgggctt
tatcacttccatgtgaatgatgaaggtgagatagtttacggtatcggtgcaatcaaaggg
gtcggtgaaggtccgattgaagcgattgttgaagcgcgtcaacaaggcggcatatttaaa
gagatttttgacctctgtgcacgagttgatattaaaaaaattaaccgtcgtgtgatggaa
aagcttatcatggcaggggcatttgaccgattaggccctcaccgtgcagcattgatgtct
tcccttgaagatgcgttaaaagcggctgatcaacacgctaaagcagaggcaataggccaa
gcagatatgtttggtgtcttagctgaagcacccgaacaagttgaaagttcatatgcaagc
gtacctaaatggccagagcaggtggtattggatggtgaacgcgagacgcttggtttatat
ttaacagggcatccaataacgcgatacttgagcgaaatagagcgttatactaacgggctt
agattaaaagatgtgaaccccacccctcgtggtcaagtgacaactgtggtaggtttagta
ctttcagctaaagtgattacaaccaagcgtggaaatagaattggtatttgtacgcttgat
gatcgttccggtcgtctggatattatgttattttcagatgcgctcgataaataccaacat
atgttggaaaaagacaatatcctgatagccaccggtcaggtcagctttgatgatttcaat
ggtggtaataaaatgacagtgcgtgagttaatggatattagtgaagcaagggaaaaatat
gctcgaggacttgcaatttcactgtcagataaacaaattaacgatcaattgctgaaccgg
cttcgtagcactcttgaacctcatcgttcaggaacgatcccggttcatctgtattaccag
aaggatgatgccagagccaagcttaaatttggtgttgtttggcgtgtgacgccagtggat
ccccttctgaacgatcttcgaactctgctgggtagtgagcaggtagaattagaatttgac
taa
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