Pseudoalteromonas rubra: AT705_02285
Help
Entry
AT705_02285 CDS
T04179
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_02285
Enzymes [BR:
prr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AT705_02285
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AT705_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ALU41853
UniProt:
A0A0U2P433
LinkDB
All DBs
Position
1:537369..538931
Genome browser
AA seq
520 aa
AA seq
DB search
MSKQLRLILGDQLNAGHSWYTEKSDEVLYVIAELHQETNYTRHHVQKICAFFAAMKAFAQ
ALKSAGHHVLHLTLDDTQDFASLPELLTHLIREYNIGHFAYQLPDEYRLRTQLSQFCDTL
SVTSSVYDTEHFYLANDQLGSYFKPDKRHRLEHFYRKMRGEFNVLMVDGEPLGGQWNFDS
DNRNKLKAADLAEIPEPLVFANEVGDILARLKRHQVKTIGQADELLLWPVNRVQAKSLLT
FFCQHCLPLFGRFQDAMTGKLIELGEDRGWSLYHSRLSFAINAKILSPKMVVDSAILAFE
QSQGAISLAQIEGFVRQIIGWREFVRGIYWANMPKYAELNHLQATRSLPAWFWTGDTKMR
CLSHAITQSLTFAYAHHIQRLMVTGNFCLVAGIDPDQVDAWYLGIYIDAIEWVEMPNTRG
MSQFADGGIVGSKAYAASGNYIKKMSDYCGDCAYKVTETVSESACPLNALYWRFMQQHHT
QFASNPRTKMVYSNWLKKSEEDKQALLTRAQYLLDHIEQL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaacttagattgatcctgggcgatcagcttaatgcgggtcatagctggtat
acagaaaagtccgatgaggtgctttatgttattgctgaactgcatcaggagacgaattat
acccggcaccatgtccagaaaatatgcgcgttttttgctgcaatgaaagcattcgcacag
gcacttaagtcggcagggcaccatgtattgcatctgacgctggatgatacgcaggacttt
gcatcgctacctgagctgctgacccacctgatcagggagtataatatcggtcactttgct
tatcagttgccggatgaatatcggttgcgcactcagctgtcacagttttgcgacacactg
tcagttacttcgagtgtctatgatactgaacatttctatctggctaatgaccagcttggc
agttactttaagcctgataaacggcatcggctggaacatttctatcgcaagatgcgcggt
gagtttaatgtgctcatggtcgatggagaaccgcttggcggacaatggaatttcgacagt
gataatcgcaacaagctcaaagcggccgatcttgctgagatacccgaaccgctggtgttt
gctaacgaggtcggtgatattttggcgcggctcaagcgacatcaggtcaaaaccataggg
caggcggatgagcttctgctgtggcccgttaatcgtgtacaggcaaagtccctgctgacg
ttcttttgccagcattgtttaccgttattcgggcgttttcaggatgctatgacgggtaaa
ctaattgagcttggcgaggatcggggctggagcttgtatcattctcgcttgtcatttgcc
attaatgccaaaatcctcagtcctaaaatggtggtagattcggcgattttggcatttgag
cagtcccagggagccatcagtctggcgcagatagagggatttgtgcgccagatcattggt
tggcgcgagtttgtcaggggcatttattgggccaatatgccaaagtatgctgagctcaat
catttgcaggccacacgcagcttgcctgcctggttctggacgggcgacaccaaaatgcgc
tgtctcagtcacgctatcacacaatcgctgacctttgcgtatgcccatcatattcagcgc
ctgatggtcaccggcaacttctgtctggtggctggcatagacccagatcaggtggacgcc
tggtacctggggatttacatcgacgccatagagtgggtggaaatgccaaacacccggggt
atgagccagtttgccgatggtggcattgttggctccaaggcttatgcagccagcggaaac
tacattaaaaaaatgagtgactactgcggcgactgtgcttacaaagtgacagaaacggtc
tctgagtcagcctgtccgttaaacgccttgtattggcgctttatgcagcaacaccatacg
caattcgccagtaacccgcgtacaaaaatggtgtacagcaactggctgaaaaagtctgaa
gaagataagcaggccttgctcacacgcgctcaatacttgctcgaccatatcgaacagctt
taa
DBGET
integrated database retrieval system
