Pseudoalteromonas rubra: AT705_02785
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Entry
AT705_02785 CDS
T04179
Name
(GenBank) hypothetical protein
Organism
prr
Pseudoalteromonas rubra
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
Ig_J
Ig_J_second
DUF5983_N
TIG
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-ProteinID:
ALU41949
UniProt:
A0A0U2P4A6
LinkDB
All DBs
Position
1:623393..629419
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AA seq
2008 aa
AA seq
DB search
MWADDLIPGAVDITPNSDYVAGKPGAVFDVRVAVDGDGNGLIKWAHPTPLAVHEYDVEFY
LGSTLVYQDAVTYTQMTVPTLALGTYTARVYARNIFGQRSTSVAVQFSVLQPYAPQVSVE
VDYNQVTLTASLPAIGIGTRFQWEFLGTAESPASGQRVFAQVYNRIGLQPLTTYQFRVRA
VNHLGNSDWVNVSATTTTVDLTEFINEIPLQKLSQEAQDLIADINQQVDRLRPETNNNLP
SLVAKNIDQIQGLQDVTATLDDSLANGLPNQVRLANIKLDETALALTDMQRSVFDVTGNY
TSFRQEYERRALANERLIDAIVYVDPDNGTIVNRAYQYTDSQFTLAQAHIDGVDARVSFE
ARRIKQTQDQLTEATAQIVVQAGLINQRATYTEVDAQIAGAIAALTPAYSWQFNTSDEGF
TGHSSHNALGYVVCGNILTSPAIGYSGNQNPVFRLRVRKHANSTWLGLIHFGGAQPIPLP
EPTSTDWEVVQVDATGTAGYAGTITGLTFELGACDVDYIEVGKRGANDLALRDVTARTST
IEQELDAGTGRMAQYATTAWTNAQGYQTQSNVQAALDSFNTTYGISAVLQQLADNDVIVK
ANAAQTWIDGANATIKNQVTQLLNEDGGVNQKLATAEQQLDAIAGEISQTVTQVQGLQLD
LADKTLNEVLSEYNTLLRNNELAELGVTLAHANSKLSAVTDDVRAVAEQTTQLIAMQNQS
AAGVTALGRAYANERQASAEREQRLRAEITTESGKAVAQAIDFTRAVTGYCVDANGNQVD
EQDAVSCEAAGHTWIDGPVVERSMMLATVMVDNRGYQTSNQVSTAINTFNGEYGITAALQ
TLTDNNTLVKANHAASWIAAADGYIRDQITIYNNTDGGINDQFAHVDQTLDAIAGEISRN
IVQIHGAQLADQAQSLNDVIAAYNQLMQGNDLAQQDVKLALAQDKLSAVTDELESTASYT
LELGALHHQSQAYITTLASAFASEVRASVTRDERFAAFVGDTQAAFSDVTEAFAEVDAAN
IIRDQAFSAFAANTEAAFQTVTETLASQEQALARQRTDLVAKIEQDDTATLASAITYTRV
AVGYCIDAAGNITNETDAVQCVTDGHSWVDGPLAEYIRNLAITNADGQAVSIADIRQAFE
TQDGQLVARGGWVINNQGRIVSIAGYNDGDVGSIDLSADVIRQGVMIGDTFVPTSYVDNT
DPDNPVHVFRGRLELGDYTVNSVDDIRAQDGERGPQGVPGEPGADGQTTYTWIKYAEGPT
GSGMSDSPAGRDYIGFAYNKTTPVESTNPADYIWSKLRGEPGADGQDGTDGVPGEPGADG
QTLYTWIAYSDYPHGADMYQTPSAATLYIGIAVNKTTATESNNPSDYTWSRFRGNQGVPG
QPGADGKTTYTWIKYAQSITGSGMSDYPGGLDYIGFAYNKLTPVESSNPSDYTWSKLRGE
PGTDGTDGIPGEPGADGQSLYTWIAYSDYADGRSMYQIPTDQTLYIGIAVNKTTSTESAN
PADYTWSLFKGPQGEPGLPGVPGEPGADGRTTYTWIKYAQSMTGSGMSDYPDGRDYIGFA
YNKTTPVESTNPADYIWSKLRGEPGADGQDGTDGVPGEPGADGQSLYTWIAYSDYYDGRN
MYQVPNSTTNYIGISVNKTTATESSNPADYTWSRFRGDRGQDGRDGQDGVRGPAGSTGSR
GPGQYTIGTLSGAWSDAVAVGVCDGSPVRNDVVTIYKVSDPKTQTTKYWSGVSWLSFTLH
IHGSALVDGTVFADGLVAATGTIDSITAVSGYVTINNDGISARRISSYARFVTTPGQTAA
DNPATVRINGNSGTVGNLFIYNPSSSGYGATIYTNGTYALYASRGLIGPFTGGHDGLVAK
SVHLEPGDLVRDIDLVNIADLSNAICTMGPTTKANDRAVRGVFITRTALTSRVAALRGYR
GFERFIEYRDTHDAISFNALGEGVLNVCGQGGDIDTGDYLCSSAIRGKAMRQADQEFERP
YTIAQARHPITFTHPDQVKQAAVIYLRG
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggccgatgatctaatccccggggccgtggatattacgccaaacagcgattatgta
gccggtaaaccgggcgctgtttttgatgtacgggtagcggtggatggtgacggcaatgga
ctcattaaatgggcgcaccctactccactggctgtacatgagtacgatgttgagttttat
ttgggcagtactctggtttaccaggacgcggtcacctatacacaaatgactgtcccaaca
ctggcattgggtacgtataccgcccgggtgtatgcccgcaacatatttggccagcggtct
acgtctgtggctgtgcagtttagtgtattgcaaccctatgccccgcaggtgagcgttgag
gtagattataaccaggtaacgctcactgcctccctgcccgcgattggtattggcacacgg
tttcagtgggagtttttgggcaccgctgagagcccggccagcggccagcgagtatttgcc
caggtgtacaaccgcattggcctgcaaccgctcaccacctatcagttcagggtgcgtgct
gttaatcacctgggtaacagtgactgggttaatgtgagtgccaccacaaccaccgttgac
ctaaccgagtttattaatgagataccgctacaaaaactcagccaggaggcacaggacctg
atagcggacattaaccagcaagttgaccgattgcgcccggagaccaataacaacctccct
tcactggtcgcaaaaaacatagaccaaattcaggggttgcaggatgttaccgctaccctg
gatgactcgttggccaatgggctgcccaatcaagtgcgcctggccaacatcaaactggat
gagacagcgctggcgctcacagacatgcagcggtcggtgtttgacgtaacgggtaactat
acgtcgttccggcaggagtatgaacgccgggcattggccaacgagcgactgatagatgcg
attgtctatgtggacccggacaatggcaccattgttaaccgggcctatcagtataccgac
agtcagtttactctggcccaggcgcatatcgatggtgtagatgcccgggtatcgtttgaa
gcccgccgtattaaacaaactcaggaccaacttacagaggccacagcacagatagtggtg
caggcggggttaatcaatcagcgtgctacgtatacagaggtggatgctcaaattgccgga
gccattgcagcgctaaccccggcctacagctggcagtttaataccagcgatgaggggttt
actggccatagcagccataatgccctggggtatgtggtatgtggtaatatcctaaccagc
ccggccattgggtacagcggcaaccaaaaccctgtttttaggttgcgcgtgcgcaagcat
gcaaacagcacctggctgggactgatccactttggcggggctcagccaatcccattgcct
gagccaaccagtaccgactgggaggtggtccaggtagatgcaaccggcacagctgggtat
gccggtaccataacggggctgacctttgagctgggtgcctgtgatgtggattacatcgag
gtgggcaagcgcggtgctaatgacctggccctgcgtgatgtgacggcgcgaaccagcact
attgagcaggagctggacgccggaaccggccgcatggcccagtatgcaacgacggcctgg
accaatgctcagggctaccagacacaaagcaacgtgcaggctgcacttgactcgtttaac
accacctacggcattagcgccgtactgcaacagctggccgacaacgatgtaatagtaaag
gccaacgcagcacagacctggattgatggcgctaatgccacaataaaaaaccaggttacg
cagctgctcaacgaggacggtggcgttaatcaaaagctggcaacggctgagcagcagctg
gacgcgatagccggtgagataagccaaaccgtaacgcaggtgcaaggcctgcagctggac
ctggcagataaaaccctgaacgaggtgctgagcgagtacaacaccttattgcgtaacaat
gagttggcagagctgggtgtgactctggcccatgctaacagcaagctgagcgctgtaacc
gacgacgtgcgcgcggttgcagagcaaaccacgcagctcattgccatgcaaaatcaaagt
gctgcgggggtaacagctctgggccgcgcctacgcaaatgagcgccaggcaagtgctgag
cgtgagcagcgcttacgggctgagataaccaccgagagtggtaaagccgtggcgcaggcg
attgattttacccgagcggtaaccggctactgtgttgacgcaaacggcaatcaggtagac
gagcaggatgctgtgtcctgtgaggccgctggccacacctggatagatggcccggttgta
gagcgcagtatgatgctggccaccgttatggtagataaccggggctaccaaaccagtaac
caggtaagtacggcaattaatacatttaatggcgaatatggcattactgctgccctgcag
accctgactgacaataataccttggtaaaggccaatcatgcggctagctggattgcggcc
gctgatggttacatccgtgaccaaattaccatttataacaatactgacggtggtatcaat
gaccaatttgcccatgttgaccaaaccctggatgcgattgcgggtgagataagccgtaac
attgtacaaatccacggggcccaacttgcagaccaggcgcagagcctgaacgatgtaata
gctgcctataaccagctgatgcagggtaatgacctggcacagcaggatgtaaaactggca
ctggcccaggacaaactaagtgccgttaccgacgaactggagtcaactgccagctatacc
ttggagctgggtgccctgcaccatcaaagccaggcgtacattacgaccctggctagcgcc
tttgccagtgaggtacgggcgagtgtgacacgtgacgagcggtttgctgcgtttgtgggt
gatacacaggccgcgtttagtgatgtgactgaggcgtttgccgaggttgatgcggcaaac
atcatacgggaccaggcatttagcgcctttgctgccaataccgaggcggcatttcagact
gtgactgagacgctggcgagtcaggagcaggcactggccaggcagcgtactgatctggtc
gccaaaatcgaacaagacgataccgctacactggccagtgcgattacctatactcgcgtt
gcagttgggtactgtattgatgcagctggcaacattaccaatgagactgatgccgtacag
tgcgtcactgatggtcatagttgggtagatggcccgctcgctgagtacatccgtaatctg
gcgatcacaaatgcggatggtcaggctgttagcattgccgatattcggcaggcctttgag
acccaggatggccaactcgtggcacgtggcggctgggtgatcaacaaccagggccgcata
gtctcaattgccggttacaacgacggtgacgtaggcagtattgatctgtctgcagacgtt
atccgccaaggggtgatgattggtgacacgtttgtgcccacctcatacgttgataataca
gatccggacaaccctgtgcatgtattcagaggtcgcctagagctgggtgattacaccgtt
aactccgttgatgacattcgggcgcaggacggtgagcgcggtccgcaaggggtgccaggt
gagccaggcgctgatgggcagaccacttatacatggatcaagtatgctgaggggcctact
ggttcaggtatgagcgactcccctgctgggcgcgactatattggttttgcctacaacaaa
acaacgcctgtggagtcaactaacccggcagactatatctggtcaaaactgcgtggtgag
cctggagcggatggccaggatggtacagatggtgtgcccggtgagccaggagccgatggg
cagacgttatacacctggatagcgtacagtgattatccccatggcgctgatatgtatcag
acaccaagtgccgcaacgttgtatattggcattgccgtcaacaagacgactgcgacagag
tcaaacaacccgtcggactacacctggtcgcgtttcagaggtaatcaaggcgtacctggt
caaccaggtgcagacggcaagaccacttatacctggattaaatacgcccagagcattact
ggctcaggcatgagtgactaccccggcgggctcgactatatagggtttgcctacaataaa
ctcacgcctgtggagtcgtccaacccatccgattatacctggtcgaaactacgtggagag
cccggcacagatggcacagacggtatacccggtgaacccggcgctgatgggcaatcgtta
tatacgtggattgcgtactcggactatgccgatgggcgcagtatgtatcagattcccaca
gaccaaacgctatatatcggtattgcggtaaataaaacgacttcaacagagtcagccaac
cctgcggactatacctggtcactgttcaaggggccacagggcgagccaggattgccgggc
gtacccggagaaccgggagccgacggtcgcaccacctacacatggatcaaatatgcgcaa
agcatgactggctcaggcatgagtgactaccccgacgggcgcgactacataggctttgcc
tacaacaaaacaacgcctgtggagtcaactaacccggcagactatatctggtcaaaacta
cgtggtgagcctggtgcggatggtcaggatggcacagacggtgtacccggtgagcctggt
gctgacgggcagtcactatacacctggattgcgtactcggactattacgatggccgcaat
atgtaccaggtacctaatagcaccactaattacattggcatatccgtaaataaaaccact
gctactgagtcgagcaatccggctgattatacatggtcacggtttagaggtgatcggggc
caagacggccgcgatggtcaggatggtgtcagaggacctgcaggatcaacgggctctcgt
ggtccaggtcagtacaccattggcactttgtctggcgcatggtctgacgcggttgccgta
ggtgtgtgtgatggcagcccggtacgcaatgacgttgtaaccatctacaaagtcagcgat
ccaaaaacccaaaccaccaaatactggtcgggcgtatcatggttgtcgtttacgctgcac
atacacggcagcgcgctggttgacggtacagtgtttgccgatggcctagttgcggcaact
ggcaccatcgacagcataaccgctgtatcggggtacgttacaatcaacaatgatgggatt
tctgcgcgtcgcattagttcatatgcccgctttgtcaccacccctggtcagaccgcagca
gataaccctgccactgtaaggattaatggcaacagtggcacggttggaaatctatttatc
tataaccccagcagctcgggttacggtgcaaccatttataccaatggaacctatgccctg
tacgcaagtcgcggactgataggcccgtttacaggcgggcatgacgggttggttgcaaaa
tctgtacatctggagcctggcgacctggtccgggatattgacctggttaatattgctgat
ctgtctaatgccatctgcactatgggcccgactacaaaagccaatgacagagcggtgcgc
ggtgtgtttattacgcgtactgcgttaaccagtcgggtggctgccctacgcggatatcgc
gggtttgagcgatttatcgagtaccgtgatacgcacgatgcgatctcatttaatgctctt
ggcgagggcgtgctcaacgtttgtggccagggcggcgacatcgatactggcgattacctg
tgtagcagtgcaatacggggcaaagcaatgcgccaagccgaccaggaattcgagcgcccc
tataccatcgcgcaggcgcgccaccctatcacatttacacatcccgaccaggtcaaacag
gctgcggtcatctatctacgaggataa
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