Pseudoalteromonas rubra: AT705_03345
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Entry
AT705_03345 CDS
T04179
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prr03032
]
AT705_03345
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_03345
Enzymes [BR:
prr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AT705_03345
DNA replication proteins [BR:
prr03032
]
Prokaryotic type
DNA Topoisomerases
AT705_03345
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AT705_03345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ApbA
Motif
Other DBs
NCBI-ProteinID:
ALU42055
UniProt:
A0A0U3I4S4
LinkDB
All DBs
Position
1:complement(739489..742152)
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AA seq
887 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELRNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLDKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAVIQNPDITIDELIDYIPGPDFPTAAIINGKKGIEQAYKTGRGKV
YIRARAEIETDEKTGKETIIVNEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG
MRIVIEIKRGEVGEVVLNNLYAQTQLQTVFGINMVALDNNQPKCFNLKEMLEAFIVHRRE
VVTRRTVYDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARPWELGSV
RPMLERAGEENVARPDWLDAELGIRDGQYYLSEQQAQAILDLRLHKLTGLEHEKILGEYQ
ELLDLIAELLLILSSPDRLMEVIRDELAEIKENYGDERRTEISAAAHDISLEDLINEEDV
VVTLSHEGYVKYQPLSDYEAQRRGGKGKAATKMKDEDFIERLLVANTHDTILCFSTSGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITTILPVKQYEDDKFVLMATANGVVKKTP
LTAYSRQRASGIIAINLNDGDNLIGADITDGNNDIMLFTDHGKVVRFNEKLRDSETGEIK
IDPETGEEMLALRPMGRTATGVRGIKMPDDVKVVSLIVPKNDGAILTVTENGYGKRTPLE
EYPAKSRATQGVVSIKVTDRNGRVVGAVQVQDNDEIMLISNRGTLVRTRVNEVSTVGRNT
QGVILIRTVDDEQVVGLQRIEEIEIDDTLEGEAELVETPDTDEQAPE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcttgccaatgaaatcctcccggtcaatatcgaagacgaattgaaaaattcc
tatcttgattacgcgatgagcgtcatcgttggacgtgctttaccagacgtccgtgatggc
ctgaagcctgtgcatcgtcgcgtgctattcgcgatgaacgagttgcgtaacgactggaac
aaaccttataaaaaatcagcccgtgttgtgggcgacgtgatcggtaaataccacccacac
ggtgatagcgcagtttacgacaccattgttcgtatggctcagccgttttcactacgttat
atgctggtggatggccagggtaactttggttcagtcgatggtgactccgcggcggcaatg
cgttataccgaagtacgtatggcaaaaatgtctcatgagctactggctgatctggacaaa
gaaaccgtagactatgtgccaaactatgatggcactgagcaaattcctgacgtgttaccg
acaaaagtacctaacctgctggtgaatggttcttcgggtatcgcggttggtatggcgaca
aacatcccacctcataacctgactgaagtgatcaatggctgtctggctgtgatccaaaat
ccagatattacgattgatgagctaattgattatattccgggacctgatttcccgactgcg
gccatcatcaatggtaagaaaggcatagagcaagcgtacaaaaccggtcgtggtaaagtg
tatatccgtgctcgtgctgaaatcgaaaccgacgaaaaaaccggcaaagaaaccatcatc
gtcaatgagatcccatatcaggtcaacaaagcacgcttgattgaaaaaatcgcggagctg
gtgaaagacaaaaaggtcgaagggatcagtgcactacgtgatgagtctgacaaagacggt
atgcgtattgttattgagatcaagcgtggtgaagtgggcgaagtggtactgaacaacctg
tatgctcagactcagctacaaactgtgtttggtattaacatggttgcgctggataacaat
cagccgaagtgtttcaaccttaaagaaatgcttgaggccttcattgtccaccgccgtgaa
gttgtaactcgccgtacggtatacgacttgcgcaaagcacgcgatcgcgcgcacacgctg
gaaggtctggcaattgcgttagccaatattgacccaatcattgagcttatccgtaagtca
ccgactccagcagaagcgaaagctgcattgactgctcgtccgtgggagttgggttcagtt
cgtccaatgctcgagcgtgccggtgaagaaaacgtcgcgcgtcctgactggctcgatgcc
gagctggggatccgcgatggtcagtactatctgtctgagcaacaggcccaggctattcta
gatttacgcttacacaagctaacaggcctggagcacgaaaagattctgggcgaatatcag
gagctactggatctcattgcagaattactcttgattttgtcttcacctgatcgtctgatg
gaagtgatccgcgacgaattggctgagatcaaagaaaactatggtgacgagcgccgtaca
gagatttcagcagcagcacatgatattagcctggaagatctgatcaacgaagaagacgta
gttgtcaccttgtcacacgaaggttatgtaaaatatcagcctctgtccgattacgaagca
cagcgtcgtggtggtaaaggtaaagcagcaactaagatgaaagatgaagactttattgaa
cgtctgctggttgcaaatacccacgatacaattttgtgtttctcaacatcaggacgtttg
tactggttgaaagtgtaccagttgccgctggcatctcgtgccgcgcgtggtaagccgata
gtaaatttattaccgcttgaagcggatgaacgtatcaccactatattgccggtcaaacaa
tacgaagacgataagtttgtattgatggctacggccaatggcgttgtgaagaagacccca
ttaaccgcctacagccgtcagcgtgcaagcggtattattgccattaatctgaatgacggt
gataatctgattggtgcggacatcacagatggtaataacgacatcatgttgttcaccgat
catggtaaagtcgtacgcttcaatgagaagctgcgcgactcagaaaccggtgaaataaaa
attgaccctgaaacgggtgaagaaatgctggccttacgtcctatgggtcgtaccgcaacc
ggtgtgcgtggtattaagatgccggatgacgtcaaagtggtgtcattgattgtacctaag
aatgacggcgctattctgacggtcactgaaaatggttacggcaagcgtacaccacttgaa
gagtacccggctaagagccgtgcaacgcaaggggttgtttcaatcaaggtcacagaccgt
aacggtcgagttgttggtgcagtacaggttcaggacaacgacgagatcatgctgatttct
aatcgtggtactctggttcgcacccgcgtcaatgaggtctcgacggttggacgtaacacc
cagggtgttatcctgatcagaacggttgacgacgagcaggtagttggtttacaacgtatc
gaagagattgaaattgacgacaccctggaaggggaagcagagcttgttgaaacgcctgac
actgatgaacaggcaccagagtaa
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