Pseudoalteromonas rubra: AT705_04530
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Entry
AT705_04530 CDS
T04179
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr00300
Lysine biosynthesis
prr01100
Metabolic pathways
prr01120
Microbial metabolism in diverse environments
prr01230
Biosynthesis of amino acids
Module
prr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AT705_04530
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prr01002
]
AT705_04530
Enzymes [BR:
prr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AT705_04530
Peptidases and inhibitors [BR:
prr01002
]
Metallo peptidases
Family M20
AT705_04530
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
UBA_SIK3
Peptidase_M18
Fe_hydrogense_Fe-S_bd
Motif
Other DBs
NCBI-ProteinID:
ALU42272
UniProt:
A0A0U3I3M4
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All DBs
Position
1:1011989..1013128
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AA seq
379 aa
AA seq
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MSETHSEVVALAKALIQRPSVTPEDAGCQAMINARLSALGFNVEEHFFVDTLNTWARKGD
EGPHFCFAGHTDVVPVGNERDWHYPPFSGEIHDGMLHGRGAADMKGSLAAMVVATERFVT
RFPDHKGSISFLITSDEEGPFINGTTKVVDLLEARNEKIDMCLVGEPSSRDQLGDVVKNG
RRGSLTGHLTIKGIQGHVAYPHLAKNPIHLSTPALTELSTTQWDQGNTFFPATSFQISNI
HGGTGAGNVIPGSLDVQFNFRFSTEVTAEQLKTRVAEILDKHDLDYELHWTLNGLPFLTE
PGPLLSVTLDAIKTVTGINSNPETTGGTSDGRFIAQTGCKVIELGPVNATIHQVNECVST
ESLDQLAAIYELILEKLLT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagacacacagtgaagtagtcgcgctggccaaggcacttatccagcgcccttcc
gtcacgcctgaggatgccgggtgccaggcaatgatcaatgcccgcctgagtgcactgggg
tttaatgtcgaagagcacttcttcgttgatacacttaatacctgggcacgcaaaggagat
gaagggccacacttttgctttgcaggccacaccgacgtggtgcccgttggcaacgaacgt
gactggcactatccgcctttttcaggtgaaatacacgacggtatgctgcatggccgtggt
gctgccgatatgaaagggtcactggctgctatggtggtggcgactgaacgttttgtcacg
cgttttccagaccacaaagggtcgatcagctttttaattacctctgacgaggaaggcccc
tttattaatggcaccaccaaagtggtggatttacttgaagcaagaaatgaaaaaatagac
atgtgtctggttggcgagccctcatccagggatcagcttggtgatgtggttaaaaacgga
cgtcgtggttcactcacgggacatttgaccatcaagggaatacaaggccatgttgcctat
ccgcacttagccaagaacccaatccatctcagtacacccgcgctgactgaactcagcaca
acccaatgggatcagggtaatacttttttcccggctaccagttttcagatctcgaatatc
cacggtggcaccggggccggtaatgtcatcccaggtagcctggatgtgcagtttaatttt
cgttttagtaccgaagtgaccgcagagcaactcaagacacgtgtggccgaaatactcgac
aaacatgacctcgactatgagcttcactggacactaaacggtctgccctttttgacagag
ccgggtcctttactgagtgttaccctggatgccatcaaaacagtcaccgggattaattcg
aacccggaaaccactggcggaacctctgatggtcgcttcatcgcgcaaaccggttgtaaa
gtgattgaactgggcccggtgaatgccacgatccatcaggtcaatgagtgtgtgagtacg
gaatctctcgatcagcttgcagcaatctatgaattgatcctggaaaaactacttacatga
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