Pseudoalteromonas rubra: AT705_05725
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Entry
AT705_05725 CDS
T04179
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT705_05725 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_05725 (ruvB)
Enzymes [BR:
prr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT705_05725 (ruvB)
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AT705_05725 (ruvB)
RecFOR pathway proteins
AT705_05725 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
TIP49
AAA_14
nSTAND3
Rad17
RNA_helicase
NTPase_1
AAA_2
AAA_17
AAA_18
Sigma54_activ_2
MCM
Bac_DnaA
TsaE
ABC_tran
AAA_24
AAA_28
NB-ARC
NPHP3_N
AAA_PrkA
Resolvase
IstB_IS21
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ALU42484
UniProt:
A0A0U2X2N6
LinkDB
All DBs
Position
1:complement(1282795..1283802)
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AA seq
335 aa
AA seq
DB search
MIEADRLIEPEVQGSEEAVDRAIRPKLLADYTGQQHVKQQMEIFIEAARSREEALDHLLI
FGPPGLGKTTLANIVANELGVNIKTTSGPVLEKAGDLAAMLTNLEQGDVLFIDEIHRLSP
QVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVAELASIVSRSAHFLNLEISDAGAVEVAKRARGTPRIANRLLRRVRDFAQVKGDG
SVDELIASQALDMVDVDKCGFDYMDRKYLLAIIEKFMGGPVGLDNLAAAIGEERETIEDV
IEPYLIQQGFIQRTPRGRIVSDRAYLHFDLAKPGD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagacagactcattgagccagaagtgcagggcagtgaagaggccgtagac
agagcaatacgacctaagttgttggcggactataccggtcagcagcatgtaaagcagcaa
atggaaatcttcattgaagctgcacgcagtcgtgaagaagcactcgatcacttgctgata
tttggcccgccgggcttaggtaaaacgaccttggcaaatattgtggcgaatgaactgggt
gtgaatattaaaaccacctcagggccggtgcttgaaaaagccggcgaccttgctgcaatg
ctgaccaatctggagcaaggagatgtgttgtttattgatgaaatacatcgtttgagccct
caggttgaagagatcctataccctgcaatggaagattatcagctcgacattatgattggt
gaagggcccgccgcgcggtcgattaaactggacttgccaccttttactttggtgggggct
acgacccgtgcaggatctctgacttcccctctgagagatcgtttcggtattgtgcaacgt
cttgagttttactctgtggctgagctggcatcgattgtgtcgcgctctgcgcattttctt
aatcttgaaatcagtgacgcgggtgcggttgaagtggcgaaacgtgcccgaggcaccccg
cgtattgctaatcgcttgctgcgacgggttcgggatttcgcccaggttaaaggggacggc
agcgtagacgagctgattgccagtcaggcgctggacatggttgacgtcgataagtgtggt
ttcgattacatggatcgtaagtacttacttgcaattattgaaaaattcatggggggtcct
gtgggtttggataatctggcagcggccataggtgaagagcgtgaaaccatagaagatgtg
atagaaccttacctgatccagcagggcttcattcagcgcacgcccagaggacggatcgta
tcagacagggcttatctgcatttcgatttagcgaaaccaggcgactaa
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