Pseudoalteromonas rubra: AT705_05960
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Entry
AT705_05960 CDS
T04179
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT705_05960 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prr03019
]
AT705_05960 (rnc)
03009 Ribosome biogenesis [BR:
prr03009
]
AT705_05960 (rnc)
03036 Chromosome and associated proteins [BR:
prr03036
]
AT705_05960 (rnc)
Enzymes [BR:
prr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AT705_05960 (rnc)
Messenger RNA biogenesis [BR:
prr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AT705_05960 (rnc)
Ribosome biogenesis [BR:
prr03009
]
Eukaryotic type
90S particles
RNase
AT705_05960 (rnc)
Prokaryotic type
rRNA processing factors
AT705_05960 (rnc)
Chromosome and associated proteins [BR:
prr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AT705_05960 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ALU42529
UniProt:
A0A0L0ETG5
LinkDB
All DBs
Position
1:complement(1338285..1338962)
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AA seq
225 aa
AA seq
DB search
MKKNVTELYKKIGYEFTDQSLLEQAMTHRSHKGQHNERLEFLGDSILSFVIADALYKQFP
KAREGDLSRMRSTLVRGQTLAEFGVEFGLGDYLRLGPGELKSGGYRRESTLADAVEAIIG
AVFLDSDIETCKTLVLKWYDSRLAAISPGHNQKDPKTLLQEYLQARKLPLPGYTVIDTKG
QAHNQTFTVECIVEGMESIISVGSSRRKAEQKAAEKALKILKNDS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacgtcacagaattatacaagaaaatcggttacgaattcacagatcaaagc
ctgcttgagcaggctatgacacatcgtagccataagggtcaacataacgaacgtctggaa
tttttgggcgattcgattttaagctttgttattgcagatgcgctgtataagcagtttcct
aaagcgcgagagggcgatcttagccggatgcgttcaacgcttgtacgaggtcagacgctg
gcagagtttggtgttgagtttgggttgggcgattacctcagattgggtccgggtgagttg
aaaagcggcggttatcgtcgagaatcaaccctggcagatgcagttgaagcgattattggc
gcggtgtttttagattcagacatcgagacctgtaagacgttggtattaaagtggtatgac
tcgcgtttggcggcaatctctccaggacataaccagaaagatccgaaaactttgttgcag
gaatacctgcaagcacgcaagttaccgctacccggttatactgtaattgacactaaggga
caagcgcacaatcaaacctttacggttgaatgtattgtggaagggatggaaagtattatc
tcagtaggcagctctcgtcgtaaggctgaacaaaaagccgctgaaaaagcactaaagatt
ttaaagaatgactcctaa
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