Pseudoalteromonas rubra: AT705_09040
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Entry
AT705_09040 CDS
T04179
Name
(GenBank) ligand-gated channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prr02000
]
AT705_09040
Transporters [BR:
prr02000
]
Other transporters
Pores ion channels [TC:
1
]
AT705_09040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ALU43076
UniProt:
A0A0U2X500
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All DBs
Position
1:complement(2048487..2050592)
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AA seq
701 aa
AA seq
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MSDTFRSAGLVLSLSCLSLGMSVSVAAPLSPLATAVSAALVAPGPEHHEHESHAEEKHED
GGQDAHADGEHHDEHGHGHEMEKIVIQATRSGRIADEQPVRVELINREEIEEKAAMRPGN
ISMLVAETGGVRMQTTSPALGSANIRLQGLYGRYTQLLADGLPLYGNQAASIGLLQIPPT
DLGRVEIIKGSASSLYGGSALGGVINLISRKPGDEFKGEVLLNLTTRDGQDLTSYIESPL
NDDLKGSLTLGAHHQKSEDIDNDGWFDLAGYERYTARPRLFWEGEQGETLYVTAGAMTEQ
RNGGTKAGFTMADGNPYVQTQDSERLDGGFVYSQPMSDTLTLHARSSAMVQNHEHGFGLV
LEEDKHESYLFETSVSGYNDTTDWLLGMAYQSDVFESETFPTFDYSYEVPGLFAQLDHTL
SDTLTASVSARVDDHNEYGTQFSPRVTLLYRPGELTVRGSYAQGYFAPTPFVEDIEAAGL
SRLAPVGELQAEEAETASLDFTYAFDSVETSLTLFGSNVDNVTELEVVPTTDGTQPNQVR
LTNALGESQIRGSEVLLRYYWRDVKLTASYLYLDATQSVDGQTRTEIALTPKHSAGFVAM
WEQHGNFRAGFEAYYTGPQRLNANPFVTESDPYWHLGLMGEITTGRYSWFINFENLLDVK
QTDEHPLLLPQQAVSGQWTTDIWSRNDGFIVNAGVRIKFGH
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacgtttcgttctgccggtttggttttgtcattaagttgtttatcactgggg
atgtcggtgagtgtggcggcgccgctgagtccgctggccactgctgtgagtgctgcattg
gttgcgccggggcctgagcatcatgaacatgagtcccatgctgaagaaaagcatgaagac
gggggccaggatgcgcacgctgacggtgagcaccatgatgagcacggccacggtcatgag
atggaaaaaatcgttatccaggcgacgcgctctggccggattgccgatgagcagccggtg
cgggtggagctgatcaaccgcgaagaaatcgaagaaaaagcggcaatgcgcccgggtaac
atctctatgctagtggccgaaacgggtggtgtgcgtatgcaaaccacgtcgccagcgctg
ggcagtgccaatatccgattgcagggtttgtatggtcgttacactcagctgctggccgat
ggtctgccgctgtatggtaatcaggctgcgtcgattggcctgttacaaattccacctacg
gatttaggccgggtggagatcatcaaaggctcggcgtcgtccttatatggtggctcggcg
ctgggcggggtgatcaacctgatctcccgcaagccaggcgacgagttcaagggcgaggtg
ctgctgaatctgactacacgcgatggccaggatctgacgtcttacatcgaaagcccgctg
aacgatgacctgaaaggctcgctgacgctgggcgcacaccatcaaaagtcggaagacata
gacaacgacggctggttcgatttggccgggtatgagcgctacacagcacggccgcgtttg
ttttgggaaggagagcagggcgaaactctgtatgtcacggccggagccatgaccgagcag
cgcaacggggggactaaagctgggtttaccatggcagatggcaatccgtacgttcaaacg
caggattcagaacgtttggacggtggatttgtgtatagccagccgatgtccgacacgctc
acgctgcatgcacgctcatcggccatggtgcaaaaccatgagcacggctttggtctggtg
ctggaagaggacaagcacgaaagttatttgtttgaaaccagtgtcagtggctacaacgac
accaccgactggctactgggcatggcctatcagtcggatgtgtttgagtctgagacgttt
ccgacttttgattacagctatgaggtgccgggcctgttcgcgcagctggatcacactctg
agcgatacgctgaccgcctcagtgagtgcgcgggtggatgatcacaatgaatatggtact
cagttcagcccccgagtgaccttgttgtatcgtccgggtgagctgacggtacgcggctcc
tatgcgcagggctattttgcgccaacgccgtttgtggaagacatcgaagcggcgggttta
tcgcgcttagcacccgtcggtgagttacaggcagaggaagccgaaacggcctcactggat
tttacttatgcctttgattcggttgaaaccagtctgaccctgtttggctcaaatgtggat
aacgtgaccgagctggaggtcgtgccgacaacagatggcacccagccgaatcaggtacgc
ctgaccaatgcactgggcgagagccagatccgtggctcagaagtgctgctgcgttattac
tggcgcgacgtaaaactgaccgccagttatttatatctggatgcaacccaaagcgtggat
ggccagacgcgcacagagattgccctgacgcctaaacactcggctggatttgtcgccatg
tgggagcagcacggtaacttccgcgctgggtttgaagcctattacaccgggccgcagcgc
ctgaatgccaatccgtttgtcactgagtctgatccgtactggcatctgggcctgatgggt
gagatcaccaccgggcgttacagctggtttatcaacttcgagaacctgctggatgtgaag
caaaccgacgaacatccattgttgttaccacagcaggcggtcagtggccagtggacaacg
gatatctggtcgcgcaacgatggctttattgtgaatgctggtgtgcgcattaagtttggt
cattaa
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