Pseudoalteromonas rubra: AT705_09115
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Entry
AT705_09115 CDS
T04179
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prr03016
]
AT705_09115
Enzymes [BR:
prr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AT705_09115
Transfer RNA biogenesis [BR:
prr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT705_09115
Prokaryotic type
AT705_09115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALU43088
UniProt:
A0A0U3I5Y3
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All DBs
Position
1:complement(2068303..2069367)
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AA seq
354 aa
AA seq
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MKTCVSALNYLYGEPLARAEFKSQPEDFMVDEILDIEFTGEGEHVCLQVVKKGENTAFIA
RKLAEFAGVAPRDVSYGGLKDRHGVCTQWFSVPVPIKHSLDFSELNSDSLFVVKQVRHNR
KLRTGCHKGNRFTITLRNVSEPLDLLSRINAVRQGVPNYFGEQRFGHDGYNLEMAQRLFE
GERIRDKKLRGLVISAARSHIFNQLVSRRVAEHGLAKTWHREVFMLSGSNAFFEEDISDA
LIVRLLEADIVLSAPLLGKGEKGLTALEIEWLKPFADWWQGLGALGLKNERRALRVIPEN
LVVKTLDATTIQLSFDLPKGCYATAILRELVHHEDVSHRNYDKKGSNQDEDPAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacctgtgtatctgcgcttaactatttgtacggtgagccgttagcgcgtgctgaa
tttaagtctcagcctgaagactttatggtggatgaaatcctcgatattgaatttaccggg
gaaggggagcatgtctgtctgcaggtggtaaaaaaaggcgagaacacagcctttattgcc
cgcaagctggccgaatttgcaggcgttgcgccaagagatgttagctatggcggactcaaa
gaccgtcacggtgtatgtactcagtggttcagtgtcccggtgccaataaaacactctttg
gatttcagtgagctgaacagcgacagcctgtttgtggtgaaacaagtgcgccacaatcga
aaattgcgcaccgggtgtcacaagggtaatcgttttaccatcacattacgtaatgtcagt
gagccgttagatttgttgtcgcggataaacgccgtacgccaaggggtgccgaactatttt
ggtgagcagcgttttggccatgatggttacaacctggaaatggcacaaaggttgtttgaa
ggagagcggatccgtgataaaaaattacgcggtttggtgatctctgcggcgcgctcacac
atttttaatcagctggtttcaaggagggttgctgagcatggcctggcaaaaacctggcac
cgtgaagttttcatgctcagtggcagtaatgcattttttgaagaagacatcagtgatgcg
ctgattgtccggctacttgaagccgatattgtgttgtcagctcctttgctgggtaaaggc
gaaaaaggcctgactgcacttgaaatagaatggcttaaaccctttgccgactggtggcag
gggctgggcgctttggggcttaaaaatgagcgccgtgccctaagggtgatccccgaaaac
ctcgtggtgaaaacactcgacgcgacgaccattcagcttagttttgatttaccgaaaggg
tgttatgccaccgcgatactgcgagagctggtgcatcatgaggatgtcagtcatcgcaat
tatgataaaaaaggaagcaaccaagatgaagatcctgctcagtaa
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