Pseudoalteromonas rubra: AT705_12210
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Entry
AT705_12210 CDS
T04179
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr00071
Fatty acid degradation
prr00280
Valine, leucine and isoleucine degradation
prr00310
Lysine degradation
prr00362
Benzoate degradation
prr00380
Tryptophan metabolism
prr00410
beta-Alanine metabolism
prr00640
Propanoate metabolism
prr00650
Butanoate metabolism
prr00907
Pinene, camphor and geraniol degradation
prr00930
Caprolactam degradation
prr01100
Metabolic pathways
prr01110
Biosynthesis of secondary metabolites
prr01120
Microbial metabolism in diverse environments
prr01200
Carbon metabolism
prr01212
Fatty acid metabolism
Module
prr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AT705_12210 (fadB)
00650 Butanoate metabolism
AT705_12210 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AT705_12210 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AT705_12210 (fadB)
00310 Lysine degradation
AT705_12210 (fadB)
00380 Tryptophan metabolism
AT705_12210 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AT705_12210 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AT705_12210 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AT705_12210 (fadB)
00930 Caprolactam degradation
AT705_12210 (fadB)
Enzymes [BR:
prr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AT705_12210 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AT705_12210 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AT705_12210 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AT705_12210 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ALU43649
UniProt:
A0A0U2Z769
LinkDB
All DBs
Position
1:complement(2812861..2815023)
Genome browser
AA seq
720 aa
AA seq
DB search
MLMKRESFVVDFYKGKIAEFKFCLPGSVNKLSQQTLQDCHAALKELAQRDDIDGLIFSSD
KDHFIVGADIFEFLPTFDRPEAELVEWIKAATDVFDALEDLPFPTLSAVNGLALGGGCEW
VLATDYRIASDSAKIGLPEVKLGIMPGFGGTVRLPRLIGADNAMTWITTGKENRAADALK
VGAVDAVVAQDKLMDAALRTMEQAVAGKLDWRAKRQIKLDPLKMNRVEQGMSFAMAEGMV
MAKTKGHYPAPVMAVKTIKAAANMGRDEAMAVENASFAKLAKTAEAAAQTGIFLADQYIK
GVAKKQAKQSQTDIKQAAVLGAGIMGGGIAYQSAYKGTPIVMKDISQGALDLGMGEAAKL
LGKKVERGHMKLDKMVGTLAQIKPTLNDRDLEGSDIIVEAVVENPQIKKTVLAGLEQQLP
AGTILTSNTSTIRIDELAEGLAHPEHFCGMHFFNPVPKMPLVEIIRGAKTSDDTVAAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSQLVVEGADFTQVDKVMENVFGWPMGPAY
LLDVVGIDTANHCTGVMADGFPTRMARQDKDPVAHLANANRFGQKNQKGFYQYAPDRKGR
LKKSKDADAVALLSEICDAPAQFDKQTIIERCMVPMINEVLLCLQEGIVASPQEADMALI
YGIGFPPFRGGAFRYLDQLGLAEFVKIADKYAHLGEIYQVSEQTREWAATGKVFYKVEGQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgaaacgcgagtcctttgttgtggatttctacaaaggcaaaatcgctgagttt
aagttttgtttgccaggttcggtcaacaaattatctcagcaaaccctgcaagattgtcat
gcggcgctcaaagagctggcacaacgtgatgacatcgacggcctgatttttagctccgac
aaagaccactttattgttggagccgacattttcgagttcctgcctacctttgaccgcccg
gaagccgagctggttgaatggatcaaagcagccaccgacgtatttgatgccctggaagat
ttacctttcccaaccttgtctgcggtcaatggtctggcactgggcggtggttgtgagtgg
gtacttgctaccgattatcgtattgcctctgacagcgcaaaaattggcctgccagaagtg
aagctgggcattatgccaggctttggtggtaccgtacgtctgccacgcctcattggtgcg
gacaacgcgatgacctggatcaccacaggtaaagaaaaccgcgcggctgacgcgctaaaa
gtcggagcagtggatgccgtcgtcgctcaggataagctgatggacgccgcactgcgtacc
atggagcaagccgtagccggtaagctggactggcgtgctaagcgccaaatcaagctagac
ccgctgaaaatgaaccgcgttgagcaaggcatgagctttgcgatggccgaaggcatggtc
atggccaaaaccaaaggccactacccggcacctgttatggcggttaaaaccatcaaagct
gcagccaatatgggtcgcgatgaagcgatggcagtcgaaaacgcaagcttcgccaaactg
gctaagaccgcagaagcagcggcacaaaccgggatcttcctggccgatcagtacatcaaa
ggcgttgccaagaaacaggcgaagcaaagtcagactgacatcaagcaagcagccgttctg
ggtgctggcatcatgggtggcggtatcgcttatcagtcagcatataaaggtacaccgatt
gtcatgaaagacatcagtcagggtgcactggacttaggcatgggcgaagcggccaagttg
ctgggcaaaaaagtcgagcgtggtcacatgaagctggacaaaatggttggcacactggca
cagatcaagccaacgctgaatgaccgtgacctggaaggcagtgacatcatcgttgaagcg
gttgtcgagaacccacaaatcaagaaaaccgtactagcgggccttgagcagcaactaccc
gctggcacgatcctgacctcgaacacttcaaccattcgcatcgatgaactggcagaagga
ctagcgcatcccgaacacttctgtggtatgcacttctttaacccggtgcctaaaatgccg
ctggttgagatcattcgcggtgcaaaaacctcagatgacaccgttgcagccgttgtcgac
tatgcactgaaactgggcaagtcgccaatcgttgtgaatgactgtccaggcttctttgtt
aaccgtgtcttgttcccttactttgcgggcttcagtcagctggtcgtagagggggctgac
ttcacacaagtcgacaaagtcatggaaaatgtctttggttggccaatggggccggcttac
ctgctggacgttgttgggatcgacacagccaatcactgtaccggcgtgatggcggatggt
ttcccaacccgcatggcacgtcaggataaagatccagttgcccacctggccaacgcaaat
cgctttggacagaaaaaccagaaaggtttctaccagtatgcacctgatcgcaaaggtcgc
ctgaagaaaagcaaagatgccgacgccgttgccctgttgagtgaaatttgtgatgcgccg
gcacagtttgacaaacaaaccatcatcgagcgctgtatggtaccgatgatcaacgaagtc
ctgttgtgtctgcaagaaggcatcgttgcctcaccacaagaagccgatatggcactgatc
tacggtattggtttcccgccgttccgtggtggcgcattccgttatctggatcagctaggt
ctggcggaattcgtgaaaatcgccgacaagtacgcacatttaggcgaaatctatcaggtg
tcggagcaaacccgtgagtgggcagctaccggtaaagtattctacaaagtggagggtcag
taa
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