Pseudoalteromonas rubra: AT705_12550
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Entry
AT705_12550 CDS
T04179
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prr03009
]
AT705_12550
Enzymes [BR:
prr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AT705_12550
Ribosome biogenesis [BR:
prr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AT705_12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3482
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ALU43704
UniProt:
A0A0U3HRS3
LinkDB
All DBs
Position
1:complement(2893216..2893908)
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AA seq
230 aa
AA seq
DB search
MRLAKYLSHCGVCSRRQASRLIEAAEVTVNGHPANHIDHVTEADHILVSGQLVEGPAPKQ
LYMYHKPVGIDCKLRPDDPSSLSHYLPPGERVYPIGRLDKDSRGLLLLTNDGELCNRLIH
PRHHQEKEYRVVVDRPFDAQFCARMSAGVPVDGVITQACRVEPIAADTFTIVLRQGLNRQ
IRKMARYCGYRVVDLYRVRIANLQLDAQVLPAGHYQPIALAQLKLEEEKK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctagccaaatatctgagccactgtggtgtctgttcccgccgtcaggcgtcacga
ttgatcgaagccgccgaggtcacggtgaatggccacccggctaaccacatagatcacgtc
acagaggccgaccatattctcgtcagcggccagttggttgaggggccggcccccaaacaa
ctttacatgtatcacaaaccggttggtatcgactgtaaattacgcccggacgacccaagt
agcctgagccactatttgccacccggtgagcgagtctaccccattggccgattagacaaa
gacagccgtggactgctactactaaccaatgacggtgagctttgtaaccgcctgatccac
ccgagacatcatcaggaaaaagagtaccgggtggtggtcgaccgcccctttgatgcccaa
ttttgtgcacggatgagtgcgggtgtgccggtcgacggtgtgataacccaagcctgccgg
gttgagccaatcgctgcagatacctttaccattgtcctcaggcaggggttaaatcgccag
atccgtaaaatggcacgttactgcggttaccgggtggtggatttataccgggtgcgaata
gcaaacctgcaactcgatgcgcaagttttgccagcagggcactatcagccaattgcgttg
gcacagcttaagctcgaagaggaaaaaaaatag
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