Pseudoalteromonas rubra: AT705_12835
Help
Entry
AT705_12835 CDS
T04179
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03420
Nucleotide excision repair
prr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AT705_12835 (uvrD)
03430 Mismatch repair
AT705_12835 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_12835 (uvrD)
Enzymes [BR:
prr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT705_12835 (uvrD)
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AT705_12835 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AT705_12835 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
SAP18
ChrB_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALU45089
LinkDB
All DBs
Position
1:complement(2970755..2972920)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSELLDGLNDKQREAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRTRVEETLQNPVGGMWIGTFHGLAHRILRAHHREARLPESFQILDSDDQL
RMIKRLLKSMNIDDKKWPPKQLSWYISARKDEGQRPKDITAHDVNEQLMLQVYTAYQDAC
DRAGLVDFAEILLRCYEVLQQNPTLLRHYQQRFRHMLVDEFQDTNSIQYLWLKLLAGSDS
NIMIVGDDDQSIYGWRGARIENIKRFLTDFDAQTIRLEQNYRSTGTILKASNALIQNNAE
RMGKSLWTDGNQGEPISVYAAFNELDEARFMVGKVKSWLQGGNALSDCAVLYRSNAQSRV
LEEALLQEGLKYRIYGGMRFFERQEIKDALSYLRLISNRNDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAVLEQGHLAGRAATAIRRFIELVEQLDDKLMELELAEQAK
TTIEQSGLLAMYQAEKGEKGRARVENLEELINACGQFDLPVEEEFTSPLQGFLAYTSLES
GEGQADEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSHEESGRLEEERRLCYVG
MTRAMEKLYISHAESRRLYGQEKYHSPSRFLREIPEDCLEEIRIKTQVSRPVASGRFSAS
VSHAVFEDSNFNLGQRVLHAKFGAGTVLNYEGCGAQSRIQVNFDDVGSKWLVTAYARLQE
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcagaattactcgatggcttaaacgacaaacaacgtgaggcggttgccgca
ccgctacaaaatatgctggtattagcaggcgcaggctcgggcaaaacccgggtgctggtg
catcgcattgcctggctcatgcaggttgagcaagcttctgcgtatagcatttttgccgta
acctttaccaataaagccgccaaagagatgcgtacccgggtcgaggagaccttacaaaac
ccggtcggtggtatgtggatcggtaccttccatggcctggcccatcgtattttgcgcgcc
catcatcgcgaagccaggctaccagagtcgtttcagatcctggattccgacgaccagctg
agaatgatcaaacgcctgctgaaatcaatgaacatcgacgataaaaagtggccacctaag
cagctcagttggtatatcagcgcacgcaaagacgaaggtcagcgccccaaagacatcacc
gctcatgacgtcaacgagcaattgatgttgcaggtctatacagcctatcaggatgcctgt
gatcgcgccggtctggtcgactttgccgaaattttgctgcgttgctatgaagtactgcaa
caaaatcccacgctactgcgccattatcagcagcggttccgccatatgctggtcgacgaa
ttccaggataccaacagcattcagtatttatggctaaaactactcgccggcagcgacagc
aacatcatgatagtgggcgatgacgaccaaagtatttacggttggcgaggcgcacggatt
gagaatatcaaacgctttttaaccgacttcgacgcgcaaacgattcgccttgagcaaaac
taccgctccaccggcaccatattgaaagcgtctaatgccctgatccagaacaatgctgag
cgtatgggtaaaagcctctggaccgacggtaatcagggtgaacctatttccgtgtatgcc
gcctttaacgagctggacgaagcccgctttatggtcggtaaagtcaagtcctggctccag
ggtggtaacgcactgagcgactgtgccgtgctttaccgcagtaacgcccaatctcgggtg
ctggaagaagcgctgttgcaggaaggcctcaagtatcgcatttacggcggtatgcgcttc
ttcgaacgtcaggagatcaaagatgctctgtcttatctgcgcctgatcagcaaccgcaat
gacgacgccgcgtttgaacgagtgatcaacactccggcacgcggtatcggcgacaaaacc
ctgagccatattcgagactgtgcccgagccgagtcactccccctgtggtacgcggccaaa
gccgtgctggagcaagggcaccttgcaggccgtgccgctaccgccattcgtcgcttcatt
gaactggtcgaacagctggacgataaattgatggaactcgaactggccgagcaagccaaa
accaccatagaacaatccggtcttctggccatgtatcaggctgaaaaaggtgaaaaaggc
cgtgcccgggtagaaaacctcgaggaattgatcaacgcctgtggtcagtttgatttaccc
gtggaagaagagttcacctcgccactacaagggttcttagcctatacctcactggaatct
ggcgaaggccaggccgacgaacatgaagatgccgtgcagatgatgacgctgcactcagcc
aaaggcctggaattcccattggtctttatggtaggcgtagaagaaggcatgttcccctcg
cagcaaagccacgaagaatcgggccgtctcgaagaagagcgccgcctgtgttacgtcgga
atgacccgggccatggaaaagctttacatcagtcacgcggaaagccgccgtttgtatggg
caggaaaaataccatagcccgtcacgctttttacgtgaaattcccgaagactgtctggaa
gaaattcgcattaagacacaggtttcacgacccgtagcaagtggccgcttcagtgcgtca
gtgagccatgccgtctttgaggacagcaactttaatctgggtcagcgcgttttacatgcc
aaatttggcgctggcacagtactcaattatgagggctgcggtgctcagtcacgcattcag
gtaaactttgacgatgtcggcagcaagtggctggtcaccgcctatgccagactgcaagaa
ctctaa
DBGET
integrated database retrieval system
