Pseudoalteromonas rubra: AT705_13010
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Entry
AT705_13010 CDS
T04179
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AT705_13010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_13010
Enzymes [BR:
prr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT705_13010
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AT705_13010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
SAM_SMF
AAA_30
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALU43783
UniProt:
A0A0U3I9H1
LinkDB
All DBs
Position
1:complement(3004996..3007167)
Genome browser
AA seq
723 aa
AA seq
DB search
MRFAEVALKVPLHRTFDYRLEPQQQPCVGGRVRVKFANRACVAIVVALKSHSDVPAEKIK
AVESVLDATPVLSLEHLGFLRFGAQYYCHPLGETLFTALPGALREGEQVDKTQVSVLTLT
PAGRETTQLRAKKQLALLEQLRSAGDATASELKTLGFSQAQIKALLEKALIQEELRTDTH
WQSRPLQLGSKPRLNPEQATACSAINSETGFRTFLLEGVTGSGKTEVYLQSLEVILASGK
QALVLVPEIGLTPQTVNRFKRRFEGLPIDLWHSNLTDNERLHTWRRAELGESALVIGTRS
AIFLPFQTLGMIVVDEEHDGSFKQQDGLRYHARDLAAYRAAQGRFPLILGTATPALETLQ
KALQNRYQLLPLTKRAQTQQDNRFMLVDMKGQAEQSGFAKTSVDTMAATLARGQQVMVFL
NRRGFAPTLICHECGWLSNCTRCSTSATYHKSLSRLICHHCSEQAFVPVQCPDCGSTQIM
PTGYGTEQLEEFLSQQFADFPVHRIDRDSTRRKGSLETVLDEINQGGARLLIGTQMLAKG
HHFADVNLVVILDVDSGLYSCDFRATEHMAQLITQVAGRAGRSGEAGTVLLQTHFPEHPL
LQDLVNNGYQDFARYALREREETQMPPYSHLALIRAEATNAKLVMAFLSDLVPATPYPGI
QLLGPIPAPMERLAGKYRYQLHIQAAQRKVLHQYLAQLADYIGQHKLANRVRWSIDVDPM
DTY
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcgccgaagtcgctttaaaagtgcctttacatagaacctttgattaccgcctc
gaaccacaacagcagccctgtgtgggaggccgagtcagagtaaaatttgccaatcgggcc
tgtgttgccattgtcgtggcgttaaaatctcacagcgatgtgcccgcagagaaaataaaa
gccgttgagtctgtgttggatgccacccccgtgctgtcactagagcaccttggattttta
cgcttcggtgcccagtattattgccaccctctgggcgaaaccttgtttactgccctgcct
ggtgcactgcgcgaaggcgagcaagttgataaaacccaggtgtcggtactgacgttgaca
ccagccgggcgtgaaaccactcagctcagagcaaaaaaacaattggcattgcttgagcaa
ctgcgcagcgccggagatgccaccgccagtgaactcaaaacgctgggcttctcacaggca
cagatcaaagccttattagaaaaagcactgatccaggaagagctgcgcaccgatacgcac
tggcaatccagaccgttacagttgggcagtaagcccaggcttaatccggagcaggctacc
gcctgcagtgcaatcaacagtgagaccgggtttcgtacctttttactcgaaggtgtgaca
ggcagtggtaagaccgaagtgtacctgcaaagcctcgaagtcatcttagctagtggtaaa
caggcgcttgtgctggtaccagaaatagggctgacgccacagacagttaaccgctttaaa
cgccgcttcgagggattacccattgatctttggcactctaatctgaccgacaatgaacgc
ttacacacctggcgtcgcgccgagctgggagagtcggctctggtaattggtacccgctca
gccatctttttgccctttcagacactgggcatgatagtggtcgatgaagaacacgacggt
tcgttcaaacaacaagacgggttgcgctaccatgcccgtgatctggcggcctaccgtgct
gcacaaggtcgctttcctttaatcctcggcactgccaccccagcactggaaaccctgcaa
aaagcgctgcaaaatcgctatcaattgctgccactcaccaaacgagcacaaacccagcaa
gataaccgcttcatgttggttgatatgaaaggtcaggcggagcaatccggatttgccaag
accagtgtggataccatggctgccacattggcacgcggacaacaggtgatggtatttctc
aatcggcgtggctttgccccgacacttatctgtcatgaatgtggctggctgagcaattgc
acccgctgcagtaccagcgccacctatcataaatcccttagccggctgatctgtcaccac
tgctctgaacaagcgtttgtgcccgtgcaatgccctgactgtggcagcactcagatcatg
cccacgggatatggcacagaacaactggaagagtttttatcccagcaatttgctgatttt
ccggtgcaccgtatagatcgggattcaacccggcgcaaaggcagcctcgaaaccgtgctg
gatgaaattaaccagggcggtgcgcgactgctcattggcactcagatgctcgccaagggg
caccatttcgctgacgtcaatctggtggtgatcctcgacgtggacagcggcttgtattcg
tgcgattttcgcgccacggagcacatggcgcagctcattacccaagtcgctgggcgggcc
gggcgcagcggcgaagccggcaccgtgctgttgcaaacccacttcccggagcatcctttg
ttacaggatctggtcaacaacggctatcaggattttgcccgctatgcattgcgcgaacgc
gaggaaacccagatgcctccctacagccacctagctttgatccgtgcggaagccaccaac
gcaaaactggttatggcgtttttatcagatctggttccagccaccccctaccctggtata
caattactcggaccgatccccgcgccgatggaacgcctggccggaaagtaccgatatcaa
ttgcatattcaggcagcgcaacgcaaagtactgcatcaatacctggcacaactggctgat
tatattggccagcataaactcgccaaccgggtgcgctggagtattgacgttgaccctatg
gatacctattaa
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