Pseudoalteromonas rubra: AT705_16050
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Entry
AT705_16050 CDS
T04179
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prr03009
]
AT705_16050
Enzymes [BR:
prr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT705_16050
Ribosome biogenesis [BR:
prr03009
]
Prokaryotic type
rRNA helicases
AT705_16050
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UTP25_NTPase-like
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
ALU44335
UniProt:
A0A0U3I8I9
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All DBs
Position
1:complement(3691973..3693205)
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AA seq
410 aa
AA seq
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MQFTEFDLDGTLLTAIKKMGFEQATSIQQLAIPEALLGRDILASAPTGTGKTAAFLIPAI
QYLMDFPRRDPGFARVLIMTPTRELAYQVFEQCEALAAGTHLKIGVVTGGINYGSHKEIF
EKNNDILIATPGRLMEYLETENFHADNVELLILDEADRMLDLGFKKEMLKICNEAKNRRQ
CFLFSATLEGDSVELFAERILKDPALLEAESSRKEKGKIHQWIHLADDYQHKLAILASLL
QSEEVTKAIVFVKTRERLEKLVGELYTQDIKTTWLRGEMPQDKRMAAMASFHSGRTRILV
ATDVAARGIDVADISHVINFDMPRTADIYVHRIGRTGRAGKKGTAISLVEAHDAEILGKV
ERYTEQKLKRRVVEGLEPKHKEAKLPKKKKDPVKIKAKKKAAKAKTKKKK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttactgaattcgatctcgacggcacgctactgactgccataaaaaaaatgggc
tttgagcaggccaccagcatacaacagctggccattccagaggctttgttaggccgagac
atccttgcttccgcgccaacgggcacaggtaaaacagccgccttcctgatcccggcaatt
cagtatttgatggatttcccgcgtcgcgacccaggttttgcccgtgtgctgatcatgaca
cccacccgtgagctggcctatcaggtgtttgagcaatgcgaagcactggcggcaggcacg
cacctgaaaatcggcgtggtaaccggtggtattaactatggcagccacaaagaaatcttc
gaaaagaacaacgatattctgatagccacaccaggtcgtctgatggaataccttgagacc
gagaactttcatgccgacaatgttgagctgctcatcctcgatgaagccgaccgcatgctg
gatttgggctttaaaaaagaaatgctcaaaatctgtaatgaagcaaaaaaccgtcgccag
tgtttccttttttctgccacactggaaggcgacagcgtcgagctgtttgcggagcgtatt
ttaaaagatccggcactacttgaggcagagtcttcacgtaaagaaaaaggcaaaatccac
cagtggatccacctggcagatgactatcagcacaagctggccatcctggctagcctgcta
caaagcgaggaagtgaccaaggccatcgtatttgtaaagacccgtgagcgtctcgaaaaa
ctggttggcgagttatacacccaggacatcaaaaccacctggctgcgtggtgaaatgccg
caggacaagcgcatggccgccatggccagcttccacagtggtcgcacccgcattttggtc
gccaccgacgtggcggcgcgtggtatcgacgttgcggatatcagccatgtgattaacttt
gatatgccgcgcactgctgacatttatgttcaccgtattggccgtaccggtcgtgcgggt
aaaaaaggcaccgccatttcactggttgaagcccatgatgccgagatcctgggtaaggtt
gagcgctacacggaacagaagctgaaacgccgtgtggttgaagggctggagccgaaacac
aaagaagccaagttaccaaaaaagaaaaaagatccggttaaaatcaaagcgaaaaagaaa
gcagctaaagccaaaacaaaaaagaaaaagtaa
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