KEGG   Pseudoalteromonas rubra: AT705_18830
Entry
AT705_18830       CDS       T04179                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
prr  Pseudoalteromonas rubra
Pathway
prr02020  Two-component system
prr02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AT705_18830
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AT705_18830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prr03021]
    AT705_18830
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:prr02035]
    AT705_18830
Transcription machinery [BR:prr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AT705_18830
Bacterial motility proteins [BR:prr02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AT705_18830
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 GerE UPF0122
Other DBs
NCBI-ProteinID: ALU44820
UniProt: A0A0L0ERR3
LinkDB
Position
1:4390454..4391188
AA seq 244 aa
MASPVNRMAGYKTTDHLHKVVERHTPLVKKVACHLLARLPASVQLDDLVQSGMIGLIEAC
KNFDASKGASFETFAGIRIRGAMIDEIRRGDWAPRSVHKNGRMVAEAIAELEAQLGREPK
DTEIAEKLDITLDEYHHILHDVNASKVIGIEDLGVDEDVISPAGNDFALDKPFNNVKNER
FNESLVNAIKTLPERDALVLSLYYNDEMNLKEIGAILEVSESRVSQIHGQAMIKLRAKIN
DWIN
NT seq 735 nt   +upstreamnt  +downstreamnt
atggcttcaccggtcaaccgcatggcgggatataaaacgacagaccacctacataaggtg
gtggaacgtcatacgcctttagtgaaaaaggtggcctgtcatttgttagccagattacca
gccagtgttcagctcgatgatttagtccagtcaggtatgattggactgatagaagcctgc
aaaaattttgacgcgagcaaaggggcgagctttgaaacttttgcaggaattcgaattcgt
ggcgcaatgattgacgagatccgccgtggtgactgggcgccccgctcggtacacaaaaac
ggtcgcatggttgcagaggccattgctgagctagaagcacagcttggacgggaaccaaaa
gatactgaaatcgctgaaaaacttgatattacgctagatgagtaccatcatattttacat
gatgtcaatgcaagtaaagtgatcggcatcgaagacttgggggtagatgaagacgtaatt
tctcccgcaggcaacgattttgcgctagacaaaccattcaataatgttaaaaatgagcgc
tttaacgaatcgttagtcaatgcgatcaagactttacctgagcgcgatgctttggtgttg
tctttgtattataacgatgagatgaatttaaaagagattggtgcgatcttagaggtcagc
gaatctcgagtgagtcagattcacggtcaagcaatgatcaagcttcgtgcgaagatcaat
gactggatcaattag

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