Pseudoalteromonas rubra: AT705_21325
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Entry
AT705_21325 CDS
T04179
Name
(GenBank) transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
prr
Pseudoalteromonas rubra
Pathway
prr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT705_21325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prr03000
]
AT705_21325
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_21325
Enzymes [BR:
prr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT705_21325
Transcription factors [BR:
prr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AT705_21325
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT705_21325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DAO_C
Motif
Other DBs
NCBI-ProteinID:
ALU45484
UniProt:
A0A0U3IQA4
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All DBs
Position
2:494890..496248
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AA seq
452 aa
AA seq
DB search
MFSSEVCARARQSRDARFDGLFYVAVKSTGIYCRPICPAPAAKEHNVQYYQHAHCAAQAG
FRPCIRCRPDSAPGSYAWLGTQTTAVRAKRLIDGGFLGSASVTQLADKLGITTRYLTKLF
QQYYGIAPKKYALFKQCDLAKQLLQQTALPITQVAYACGFNSQRRFNDAFSRLYQITPSS
LRHGAEVSQQVELMMAFRPPYNWQAMCEFLAHRLVTPLEWLDDTSYGRNYRLGDYQGCFT
AHYEESQNRFRVTIEISDLKGLPLVVNNIRRVLDLDADAAFINTHLQQHCSDIRLQDGLR
LPGIWTPFEAGIRAVLGQQISVTAARNLMIQLVEQLGEKQKNGRYQFPSADVIASSDLSF
FKMPERRKQAIIALAQHHVDNPDCTPESWLAIKGIGPWTVDYASMRGLSAPDIYLGGDLG
VQKAIDKVGQIDEPGCAPFRSYLTFQLWQQIK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttcagaagtttgtgccagggcacgacagagccgggatgcacggtttgatggt
ttattttatgttgcggtcaagagtacgggtatatattgtcgcccgatatgtccggccccg
gcagcaaaagagcacaatgtgcagtattaccaacatgcacattgtgcggcacaggcaggg
tttagaccttgcattcgttgtcgaccagacagtgcgcctggtagttatgcctggctaggc
actcaaactacagctgtcagagcgaaaagattgattgacggtggttttttgggcagtgca
agtgtgactcaattggccgacaaattgggaattacgacacgatacctgactaaactgttt
caacagtattatggtatagcgcccaaaaaatatgcgctgtttaaacagtgtgacttagca
aagcagttgttgcagcaaacagccttaccgattacccaggttgcgtatgcctgtgggttt
aactcgcagcgtcgttttaacgacgcattcagtcggctttatcagattacgccatccagc
ttacgtcacggtgctgaagtgagtcagcaggttgaattaatgatggcctttcgtccccct
tacaattggcaggcgatgtgcgagtttttagcgcatcgtttggtgacgcctctggagtgg
ttagatgacacatcttacgggcgtaattatagattgggcgattatcaaggttgctttacg
gcgcattatgaggagtctcagaaccgcttcagagtaacgattgagatcagcgatcttaaa
ggattacctttggtggtcaataatatccgccgggtattggatttagatgcggacgccgcg
tttatcaacacgcatttacagcaacattgtagtgacattaggcttcaggacgggctgaga
ttacctgggatctggactccttttgaagcgggaatacgcgctgttttagggcagcaaatc
agtgttacggctgccaggaacctaatgatccagctagttgaacagctgggagaaaagcag
aaaaatggcaggtatcaatttccctcagcagacgttattgcgtcatctgacctgtcgttt
tttaaaatgcctgaacgccgtaagcaggcaataatagccctagcgcagcatcatgtggac
aatccagattgcacaccagaatcctggctggcaattaaaggaataggtccctggactgtg
gactatgcaagcatgcggggactgagtgcgccggatatttatttgggcggggatctcgga
gtgcaaaaagccattgataaggtcgggcagatagatgagcctggctgtgcgccatttaga
agctatctgacttttcagctatggcagcaaataaaataa
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