Pseudoalteromonas rubra: AT705_21820
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Entry
AT705_21820 CDS
T04179
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prr03032
]
AT705_21820
03036 Chromosome and associated proteins [BR:
prr03036
]
AT705_21820
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_21820
DNA replication proteins [BR:
prr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AT705_21820
Chromosome and associated proteins [BR:
prr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AT705_21820
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AT705_21820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
TFIIB
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
ALU45579
UniProt:
A0A0L0EQZ4
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All DBs
Position
2:625472..625747
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AA seq
91 aa
AA seq
DB search
MNKAQLVEKMAADAEISKAAATRALEAFTGAVTQSLKDGNSVALVGFGTFSVKERAARTG
RNPQTGAEIQIPAANIPSFKAGKGLKDQVNP
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagctcaactagttgaaaagatggcggctgacgctgagatctcaaaagctgca
gcgacacgcgcgctggaagcattcactggtgctgtaactcagtctcttaaagatggtaac
tcagtggcactggttggttttggcactttctctgtaaaagagcgtgcagcgcgtacgggt
cgtaacccgcaaactggcgctgaaatccaaattccagcggcaaatatcccttctttcaaa
gcgggtaaaggccttaaggatcaagttaatccttaa
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