Pseudoalteromonas rubra: AT705_22410
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Entry
AT705_22410 CDS
T04179
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_22410
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AT705_22410
Archaeal homologous recombinant proteins
AT705_22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ALU45694
UniProt:
A0A0U3GZC6
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All DBs
Position
2:781832..783052
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AA seq
406 aa
AA seq
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MKVLHTSDWHLGQQFYEHSRHAEHQHFLDWLCVTLTSHQINVLIVSGDIYHSATPSAMAE
QQLYAFIRRAKADNPDLHIVITAGNHDSANRIETAKPLLSQFDTHVVGRFDKHNPQDVVK
TLNTGLGTLQVVAMPFLRSADLDTQADDPLAYQRGVERAYQAAYQGLDAQLPVLAMGHLH
AKGGSISGDSERNITIGGFDAITADVFGERPDYVALGHLHKAQKVAGSEAIRYCGTPLPM
SFSERNYRHQVLLVEFSDNELCSVKPLDVPRLKPVILLPERGGATLDELIALLNELDLSQ
YQNQGTATPYLRLRLNASDTDSQFRTKIEQALANKQVHFCGIERVRNTQQSTDMPHFEDL
GQVEKLEPMSLLELAYRAQIDSEQAVPQALQDCLMQVLASVQEQEA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttacacacatccgactggcatctgggtcaacagttttacgagcacagccgt
catgctgaacatcagcattttctcgactggctgtgcgtcacactcacttctcatcaaatt
aatgtactgatagtcagtggcgacatttatcacagtgccaccccttcggcgatggctgag
cagcagctgtatgcctttatcaggcgtgcaaaagccgataatccagacttacacattgtt
atcactgcaggcaatcatgattcagccaatcgaatagaaacggctaaaccactgttgagt
caattcgacacccatgttgtcggccggtttgataagcataatccccaggatgtggtaaaa
accctcaatactggccttggcactttgcaggttgtggccatgccgtttttacgcagcgcc
gatctggatactcaagccgatgatcctttggcctatcaacgtggcgttgaacgtgcgtac
caggctgcttaccaggggttagatgcacaacttccggtgctggctatgggtcatttacat
gccaaaggtggcagtatttccggcgattcagagcgcaatattaccattggcggatttgat
gccattactgcggatgtgtttggggaacgtcccgattacgttgcgcttggacacttacat
aaagcgcaaaaagtcgctggcagcgaggctattcgctattgcggtacacctctgccgatg
tcgttttctgagcgtaattatcgtcatcaggtactgctggtggaattttccgacaacgag
ctttgcagtgtaaagccccttgacgtgccgcgccttaaaccggtgattttactgcccgaa
cgcggtggggcgacgttggatgagctcattgctttgctcaacgaactcgacttatcgcaa
taccagaatcagggtacagcaacaccttacttgaggctgcggctcaacgccagtgatacc
gacagtcagtttcgcactaagattgaacaggcactggcgaataaacaagtgcacttctgt
ggcattgagcgtgtgcgtaatacgcaacagagtacagacatgccgcattttgaagacctg
ggacaggttgagaaactggaacctatgagtttattggaactggcgtatcgggcacagata
gatagtgaacaagccgtgccacaagctttgcaggattgcctgatgcaagtgctggccagt
gtacaggaacaggaagcatga
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