Pseudoalteromonas rubra: AT705_22415
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Entry
AT705_22415 CDS
T04179
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prr03400
]
AT705_22415
DNA repair and recombination proteins [BR:
prr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AT705_22415
Archaeal homologous recombinant proteins
AT705_22415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
RsgA_GTPase
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALU45695
UniProt:
A0A0U3IC62
LinkDB
All DBs
Position
2:783049..786705
Genome browser
AA seq
1218 aa
AA seq
DB search
MKLLGIQVQNLASLADADIDFTQPPLKDTGLFAITGDTGAGKSTLLDAICLALYGKTARL
KADAKNKVMLNGDELKLNDPRNLLRRGCVSARAEVTFCGQDGSQYRASWRVGRARNKLDG
RIKEAEHQVVRLADDTVLTTKTTEAKQLLEQLLGLNFEQFSRAVLLAQHEFAAFLKANSD
ERAQLLETLTGTAKFSVIGKAIFEHHKAKQDALEQRKQSLNHVNLLSDEALAENQHTAAG
LTAAIATARDEEKHLEQGIFWHQACNKLAEQCHQAELEQADCQQRLTTQAHDFDKARRAK
AVEVIADNRAQARDMTAQLKQLELDISQLQQQDFAPQIRIAQDELQAAQTRLSEAKNQLQ
ISTPALQSLRELDQQREANKQLLAQNSAEHNEQREQHEALQQRSETLGAQLQKDGQQVAR
LQQKCQADPDLTRVSEQWSQVSGALKHWQACQAQLGKLAQEQQHTKASADKDTQTQQALQ
PRLTELHQQLAGIEQNLSVTQSQLSELDYETLQFQRTQLIQAQQNQSQHAQLQQEQGEHR
LHIDRLRHQHHSLQQQLKDTEQQDELTRQRVLLTQENLQQVRFRASDSVSKLRTQLVAGQ
ECMVCGSTEHPYGVDHIDSHWQTLIADFESQYQAAEQARAQTQQRYHDLVGQAEQCNGQL
QAALQHEAQLNSKLAQIAELLAQLPVEFRNIADPQALLAQLDHKLQTYSQLSKTQQQLWQ
QQQTAQRDIQQLEQQNQQLQSQLERAAQAMAYAQTRQTELATEQQETLSQIRQVYSTSAW
WHAFEQSPEQAITQLGEQVHVRQQQLQQLSELQQKIDEGEQQAKLLRQQSQDKQAQLDKT
AHARQTLTDKGDVLTRERTAIQPLEISADNWHQSLLDEQQHAESTQAQATQRVADLRQAQ
ESQALTLAHKQQSQQQLQESLAKVQSRYQSWLVELQTQFDTLSEADVEALLQWDKSQWQA
LLAEYEAVSKALHTAQNKHIHLHEELASLRAKPVTEQGQAQLTERLAQLQQARDANQAQL
ISVNTVLKQHEDNQAYLAEQYEALQAQQAEYEHWHLLNRLLGDATGKTMRNLAQTQTLRI
LLQYANHHLSSLSHRYRLTVIGQSLEIAIIDRDMADEQRSVNTLSGGESFLVSLALALGL
ASLSSNQVQINSLFIDEGFGTLDPQTLSVALDALDALQSQGRKVGVISHVAEMTERVATQ
IKVQKQAGGFSSVTISER
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaaactactagggatccaggtgcagaatctggcgtcactggcggatgccgacattgat
tttacccagccaccgttaaaagacaccggcctgtttgccatcactggcgatactggcgcg
ggcaaaagcaccttgcttgatgcaatatgtctggcactgtacggtaaaaccgcacgactc
aaggccgacgcaaaaaacaaagtgatgctcaacggcgatgagctgaaactcaatgatccc
cgaaacttgctgcgtcgtggctgtgtcagcgcccgtgccgaggtaacattttgtggtcag
gatggcagtcaataccgtgccagctggcgcgtcggtcgcgcccgtaacaagctggatggc
cgtattaaagaagctgagcatcaggtcgtacgccttgctgatgatacggtactgacaact
aaaaccaccgaggccaagcagctgctggaacagttactgggtctgaactttgaacagttt
tctcgtgcggtgcttctcgcacagcatgaatttgctgcatttttgaaagccaatagtgat
gagcgggcacaattactcgaaacccttaccggcacggctaagtttagcgtgataggtaaa
gccatatttgagcatcacaaagcaaagcaagatgcgctggaacagcgtaagcaatcactg
aaccatgtgaatctactgagtgatgaagcactggccgaaaatcaacacaccgcagcgggt
ttgacggcagccattgccacggctcgtgatgaagaaaagcatctggagcaaggcattttc
tggcatcaggcttgtaacaagctggctgagcaatgtcatcaggctgagctggaacaggcc
gattgccagcagcgactgactacgcaagcgcatgactttgacaaagcgagacgcgccaaa
gctgtagaggtgatcgcagataaccgggcccaggctcgggatatgactgcccagcttaaa
caattagagcttgatatcagccagttgcaacagcaggacttcgcgccgcagatccggatc
gcgcaagatgaactccaagccgctcagacacgactcagtgaggcaaaaaaccagttgcag
atcagtacccctgcccttcaatcattacgcgagctggaccagcagcgcgaagccaacaaa
cagctgctggcacaaaacagtgcagaacataacgagcaacgtgagcagcatgaagcattg
caacagcgcagtgaaacactgggggctcagctacaaaaggatggtcagcaggttgcccgg
ttgcagcaaaagtgccaggcagatccggacctgacgcgtgtgagtgagcagtggtcacag
gtaagcggtgcattaaagcactggcaggcatgtcaggcacagctcggtaaactggcccaa
gagcaacagcacacaaaagccagtgcagacaaagacacgcaaacacaacaggcgctgcaa
cccaggctgacagaattacatcaacagttggccggtattgagcaaaacctgagcgtgact
cagtcgcagctgagcgaattggattatgagaccttacaatttcagcgtacccagttaatt
caggcgcagcaaaatcagtcacagcatgcccagctgcaacaggagcagggcgagcaccga
cttcacattgatcgtttgcggcatcaacatcacagcctgcaacagcaacttaaagacact
gagcagcaagatgaactgaccagacagcgagttttgctgactcaggaaaatttgcagcaa
gtccgctttcgggccagtgacagtgttagtaaactgagaacgcagctggttgcgggccag
gagtgcatggtgtgtggctcgacggagcacccttatggtgtagatcacatcgacagtcac
tggcaaaccctgattgctgattttgaatcgcaatatcaggctgctgaacaagcccgcgcg
cagacgcagcaacgttaccatgacctggttggtcaggctgagcaatgcaatggtcagtta
caggcggcactgcaacatgaagcacaactcaatagcaagcttgcgcaaattgccgaatta
ctggcgcagttgcctgttgagtttcgcaatatcgcggaccctcaggcgttgctggctcag
ttggatcacaagctacaaacctacagccagctgagtaaaacacagcaacagctttggcag
caacagcagacagctcagcgcgacatacagcaactggaacaacaaaaccaacagttacaa
agtcagctcgaacgtgccgcccaggcaatggcttatgcccaaaccaggcaaacagagctt
gcgacggagcagcaagaaaccctgtcgcagatccggcaggtatattcaacctctgcgtgg
tggcacgcgtttgagcaatcacccgagcaggcgatcactcaactgggcgagcaagtgcat
gtcagacagcagcaactgcaacagctcagtgaattacagcaaaagattgacgaaggtgaa
cagcaggctaaattgctacgccagcaaagtcaggataagcaggcacagcttgataaaacg
gcccatgcccgtcagacactgactgataaaggggacgtactgacccgtgaacgaacggcg
attcagccacttgagattagcgcagacaactggcatcagtctttactggatgaacaacag
cacgctgaaagcacccaggctcaggcaacgcagcgtgttgcagatctgcgtcaggcgcag
gaatcacaggcactgacgctggcacataagcagcaatcacaacagcaactgcaagaatcg
ctggcaaaagttcagagccgttaccagagctggctggtggagctgcaaactcagttcgac
acgcttagcgaagcggatgttgaggcgctgttacagtgggataagtcgcagtggcaagcc
ttgctggccgaatatgaggctgtgagcaaagctctacacactgcgcagaataaacacatt
catctgcatgaagaactggcatctttacgggctaagcctgtgactgagcaaggccaggcg
cagcttactgagcgactggctcagttgcaacaagcgcgcgatgccaatcaggcacaactg
atcagtgtaaatacagtactgaaacagcatgaagacaaccaggcttatctggccgagcaa
tatgaggcacttcaggcgcagcaggctgaatacgagcactggcacctgttaaatcgcttg
ttgggtgatgccacgggtaaaaccatgcgtaacttggctcaaacacagacactcaggatc
ttgttgcaatatgccaatcaccacctcagcagtctgagtcatcgttaccgcctgaccgtc
atcggccagtcgctggagatcgccattattgaccgtgatatggccgatgagcagcgcagt
gtaaacactttgtccggtggtgagtccttcctggtttccttggcgctggcattgggcctc
gcgtctctgtcttctaaccaggtgcagatcaattcgttgtttatcgacgaagggttcggc
actttggatccacaaacgctcagcgtggcactggacgcactcgatgcattgcagtcacaa
gggcgcaaagtgggcgtgatctctcatgtggccgaaatgaccgagcgggtagccacgcaa
attaaagtacagaaacaggctggcggcttttcgtcggttaccatcagtgaacgataa
DBGET
integrated database retrieval system
