Pseudoalteromonas rubra: AT705_23980
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Entry
AT705_23980 CDS
T04179
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
prr
Pseudoalteromonas rubra
Brite
KEGG Orthology (KO) [BR:
prr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prr03000
]
AT705_23980
Transcription factors [BR:
prr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AT705_23980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ALU45982
UniProt:
A0A0U3H073
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All DBs
Position
2:complement(1208958..1209872)
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AA seq
304 aa
AA seq
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MITNINYNHLYYFWQVSRHGSIAAASKILHLTPQTISAQITSLEQRLGKQLFLREGRGLR
LTEYGQLTQQYADDMFAIAEEWLETTKGDLASINRTLKVGISDALPKSLVSKWLAPLIDN
ERISNLHCIDGQQAELLAQMATHKLDLVLADKPLDGDTPFKLFCHEIGKSQIGFYGMKQV
QALTGDNFPAALADTPIILPAKNSPVTSAIQYWLNELKIEISVAGHVDDSALMKALGQQG
FGVFPAPLSVREEIERHYDVNFIGAIENVYQNYYAFTPDRLIKDSIYSEFVQHARSIDDN
QEPT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgataacgaacataaattacaaccacctgtattacttttggcaggttagtcgtcacggc
agcattgccgcggccagcaaaatattgcatctgacaccccaaaccatcagcgcacagatt
accagtctggagcaacgtctgggtaagcaactgtttttaagagaaggcagaggattacga
ctgaccgagtacggacaactcacccagcaatatgccgatgacatgtttgccattgcagag
gaatggctggaaaccaccaagggtgatcttgcctctatcaatcgaacactgaaggtcggt
atttccgatgcgctgccaaagtctctggtctctaaatggttggcccccctgattgataac
gagcgtatttccaatctgcactgcattgacggacaacaagctgagctgctggcgcaaatg
gccacgcacaaactggatctggtgttggcggataagcccttagatggtgataccccgttc
aaacttttttgccacgaaatcggtaagagtcagatcgggttttatggcatgaagcaagtt
caggccttaaccggtgacaactttccggctgcattggccgacacaccaatcatactgcca
gccaagaacagtccggtcaccagcgccattcagtactggctcaatgaactcaaaatcgag
atatctgttgccggtcatgtagacgacagtgcattgatgaaagcgctggggcaacaaggg
tttggggtattccctgcacctttgtctgtacgcgaagaaatagagcgacactatgatgtg
aatttcataggtgcaatcgaaaacgtctatcagaactactatgcctttacgcctgacaga
ctcatcaaagactcgatttattccgagtttgtgcaacatgcgcgcagcatagatgacaat
caggaaccaacatga
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