Prosthecochloris sp. HL-130-GSB: B9H02_00090
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Entry
B9H02_00090 CDS
T04847
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
prs
Prosthecochloris sp. HL-130-GSB
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prs03019
]
B9H02_00090
03009 Ribosome biogenesis [BR:
prs03009
]
B9H02_00090
Messenger RNA biogenesis [BR:
prs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9H02_00090
Ribosome biogenesis [BR:
prs03009
]
Prokaryotic type
rRNA processing factors
B9H02_00090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RRP4_S1
RNase_E_G_Thio
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ARM30036
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All DBs
Position
20618..22294
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AA seq
558 aa
AA seq
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MKKTVKKQLLMNKSGDEIQVALVEDGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAA
FVDIGQKSDGFLHFSDVGTTNEDYRALLEDDEDDDNGNGQDEPADEDAQEGKAPTRAPQP
RSAGREKGNGRSEGDDQKRQSYTQMIAGKLKPNDSILVQVIKEPISNKGSRLTSDITIAG
RFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSILPEGFGAIIRTVAEHQEEELLKKDL
EKLLIKWEQIEKKLQDAEPPQLIFKEDTIISSVLRDSLTTDVTELVANSPSIYKETLNYI
RWAAPEMEKNVSLYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVVDVN
SGRYAAKKEQEENSLKTNLEAAREIVRQLRLRDIGGIIVVDFIDMLDSKNAKKVYDAMKS
ELRHDRAKSNIIPMSDFGLMQITRERIRPSLMQRMGDQCPACGGTGVVQARCTTINQIER
WLRKYALQPRVKFQKLDLYVSPTVAGPLGEQDLKTEMKWFLQHMLFVRIKPDESLRSDDF
RFYLRTNNKDLTAEYSDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactgttaaaaagcagttgctgatgaacaaatcgggcgacgagatccaggtc
gctcttgtcgaggacggacgtctggcagaactggttatcgaaaggcccgacagccttcgt
agtataggcgatatttacctgggtcgggtccacaaggttgtggaagggctcaaggctgca
tttgtcgatatcggccagaaatccgatggctttcttcatttttccgatgtggggaccaca
aacgaggattacagggcgcttcttgaagatgatgaggatgacgacaatggtaacgggcag
gatgagccagccgatgaggacgcgcaggaagggaaggcccccacaagagcacctcagccc
agatctgcaggacgggagaaggggaacggacgctcggaaggtgatgaccagaagcggcag
tcctatacccagatgattgccgggaaactcaaacccaatgattccattcttgtccaggtt
atcaaggaacctatcagcaacaagggctcgcgcctgacttccgatattaccattgcaggt
cggtttatggtgctgttgcctttcggcggtggccagattgccgtttcccgcagggttgtg
tcccgtaaggagcgggcgcgcctgaaaaaactggtacgctccatccttcccgaggggttc
ggggccattattcgcacggttgcagaacatcaggaagaagagcttctgaaaaaggacctc
gaaaaactgctgatcaaatgggagcagatcgaaaagaaactgcaggatgccgagcctcct
cagctgattttcaaggaggataccattatctcgagcgtattgcgtgattctcttacgacc
gatgtgacggaactcgttgccaattcaccctctatctacaaggagaccctgaactatatt
cgctgggccgctccggagatggagaaaaatgtgagcctttaccagggaaagctccctttg
ttcgaaggctatggtatagcaaaggatgtagagtcaattttttcccgcaaggtatggctg
aaatcaggcggttacattattatcgagcatacggaggcaatggttgtcgtcgatgtcaac
agcggtcggtatgcagccaagaaagagcaggaggagaattctctgaagaccaatctcgag
gctgcccgtgaaattgtacgtcagctgcgcctcagggacataggaggcattattgtcgtt
gactttattgatatgcttgattccaagaatgccaagaaggtatacgatgcaatgaaaagc
gaacttcgccatgaccgtgccaagtcgaatatcataccgatgtccgatttcgggcttatg
cagataacccgtgaacggatccggcccagcctgatgcagcgcatgggtgaccagtgcccc
gcctgcggaggtacaggggttgttcaggctcgctgtacaaccatcaaccagatcgagcgc
tggctgcgtaaatatgcgctgcagccgagggtgaaatttcagaaacttgacctgtatgtc
agccctacggtagccgggccgctgggtgaacaggatctgaaaaccgaaatgaaatggttt
cttcagcatatgctctttgtcaggataaagcctgacgagagcctgagaagtgatgatttc
cgtttttatttgcgaacaaacaacaaggacttaacagccgaatacagcgatttataa
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