Prosthecochloris sp. HL-130-GSB: B9H02_02195
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Entry
B9H02_02195 CDS
T04847
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
prs
Prosthecochloris sp. HL-130-GSB
Pathway
prs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B9H02_02195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prs03400
]
B9H02_02195
DNA repair and recombination proteins [BR:
prs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B9H02_02195
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B9H02_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_15
AAA_23
AAA_18
AAA_22
Viral_helicase1
cobW
AAA_21
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
ARM30352
LinkDB
All DBs
Position
complement(454178..457021)
Genome browser
AA seq
947 aa
AA seq
DB search
MSEFSHISIRGARVHNLKNISLDIPRNKLVVITGLSGSGKSSLAFDTIYAEGQRRFMETL
SAYARQYIGNIERPDVDSIDGLSPVIAIDQKSTSRSPRSTVGTITEIHDFIRLLFAKAGR
RYDPQTGHELRKQTEESITEAILSLPEGTKIQLLSPLVTGRKGHYRELFERLRKKGFLRV
RVDGTFREIEPDMQLERYKSHTIDLVVDRMVVSSDIGTRLREAVRLAVSMSEHKSAVICA
PFESTLTEQFFSTRYAYADGSTPIDTLAPNNFSFNSPYGACPVCNGLGELKQLSDELMVP
DTSRTLNQGAIEPFGKPGKRNLWQVIRAIAKTYSFSLDTPFSKIPKEARRILLHGSGTRT
FDVSYSYAGKEHIYPQEFPGAVSYVEELQKNSATARITEWAESFMSRQPCPECGGARLRK
ESLQVRINEKNIHEIESLPLPEALEFFHDLPRHLSERELLIAVPVLHEITKRIGFLLDVG
LEYITLNRSSQTLSGGEAQRIRLASQLGSQLSGVLYVLDEPSIGLHQRDNSKLISSLLHL
RDIGNTVLVVEHDKDTMLAADEIIDLGPGAGEHGGHIVGQGPAASLPSASMTAGYLRGTI
DVGTTKNRTTGDPATAPSIRIEGCTGNNLKNIDVDVPLGTLICVTGVSGSGKSTLINDTL
YPALAKHFYRSKLLTYPYRNIAGIEHIDKVVNVDQSPIGRTPRSNPATYTGAFTFIRDFY
ARLPEAKIRGYKPGRFSFNVKGGRCEACQGAGTKKIEMNFLPDVYVECDVCKGKRYNRET
LQVHYKGKSVADVLNMTVEEAVVFFQDFPRIRRILSTMQSVGLGYIKLGQQSPLLSGGEA
QRIKLSAELAKIQTGKTLYILDEPTTGLHFQDIRHLLDVLQKLVDKGNTVIIIEHNLDII
RNADWIIDLGPEGGKEGGRVIATGTPQDIASAADSHTGRFLAMELNR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattcagccatatcagcattcggggagccagggtacacaacctgaaaaacatc
tctctcgacatcccccgtaacaagcttgtcgtcatcacggggctgtcgggttcaggcaag
tcaagtctggcattcgacaccatctacgccgaaggacagcggcggttcatggaaaccctc
tcggcctatgcccgacagtacatcggaaacatagagagacccgatgtggacagcatcgac
ggattgtcacccgtcattgcaatcgatcagaaaagcaccagccgttcaccgcggtcgacg
gtaggcacaattacggaaatccatgatttcatacgcctgctctttgccaaggcaggcaga
cgatacgacccccagacaggtcatgaactccggaaacagacagaagagtctattaccgaa
gccattctttcccttcctgaaggcacaaaaattcagctcctctcaccgcttgtcaccgga
aggaaaggccattacagagaactgttcgaacgtttgcggaaaaaagggtttctccgagtg
cgcgttgatggcacatttcgggaaatagaacctgacatgcagcttgaacgctacaaaagc
cataccatcgatctcgtggtcgaccgcatggtggtcagttccgatatcggcacacgtctc
agagaggcagtcaggctggccgtcagtatgtccgaacataaatcagcagttatctgcgct
ccatttgaaagcacacttacagaacagtttttcagcacccgctacgcctatgccgacgga
tcaaccccgatagatacactggcgccgaacaatttcagcttcaactcgccatacggcgca
tgcccggtatgtaacggcctgggtgaactcaagcagctttccgacgagctcatggtcccg
gataccagccggaccctcaaccagggagcaatagaaccgttcgggaaaccgggaaaacga
aatctgtggcaggtcatcagggcaatagcgaaaacatacagtttcagcctcgacaccccg
ttttcgaaaatcccgaaagaagcgcgcaggattcttcttcacggatcgggaacaaggaca
tttgatgtctcttacagttatgccggcaaagagcatatctatccccaggaattccccgga
gctgtctcctatgtggaagaactgcagaaaaactctgcaacagcacggatcactgagtgg
gcagaaagcttcatgagccgtcagccctgccctgagtgcggaggagccaggctgagaaaa
gagagccttcaggtcaggatcaacgaaaaaaacattcacgagatcgagtcactgccgtta
cctgaggctctggaattttttcacgatctgcctcgccatctttctgaacgggaactcctg
atagcggtaccggtattgcatgaaatcacaaaacgcatcggatttcttctcgatgtaggt
cttgaatatatcacactcaaccgcagttcgcagaccctttcaggaggcgaagcccagcgc
atacgactggcctcgcaactcggctcgcaactcagcggtgtactctatgtcctcgatgaa
ccaagcataggcctgcatcagagggataacagcaaactcatctcatcactcctgcatctg
cgagatatcggcaacacggtactggtagtcgagcatgacaaggataccatgctcgctgcc
gatgaaattatcgatctcggacccggtgcaggagaacacggaggacacattgtaggccag
ggacctgcagcctcattaccgtccgcatccatgaccgccggatacctgcggggaaccatc
gatgtaggaacgacaaagaacaggacaaccggtgatcctgcaacggcaccatcgatacgg
attgaaggatgcacgggaaataaccttaaaaacatcgatgtcgacgttccgctcgggacc
ctcatctgtgtgacaggggtcagcggatcaggaaaatccaccctcatcaacgacacgctc
tatccggcacttgcaaaacatttttaccgctcgaagcttctcacctatccttacagaaac
attgccggaattgaacatatcgacaaagtcgtcaatgtcgaccagtcaccgataggcagg
actccccggtcaaatcccgctacatacaccggagcgtttacgtttatccgtgatttttac
gcccgccttccggaagcgaagatccgcggttacaaacccggacgtttcagcttcaacgtc
aaaggaggacggtgcgaggcatgccagggcgcaggcacgaaaaaaatcgagatgaatttt
cttcccgacgtgtatgtagaatgcgacgtctgcaagggcaaacgttacaacagggaaaca
ctgcaggtccattacaaaggaaagtctgtcgccgacgtcctgaacatgactgtcgaagaa
gcagttgtttttttccaggacttccccagaatccgcaggattctttccaccatgcaaagc
gtggggctgggatacataaaactgggccagcagtctccgctgctttccggaggtgaagcc
cagcgaataaaactctcggccgaactcgcaaaaatacagacaggaaaaaccctctacatt
ctcgatgaacccactacaggcctgcatttccaggacatccggcacctgctcgatgtgctc
cagaaactggtcgacaagggtaataccgtcatcatcatcgaacacaacctcgatatcatc
agaaatgcagactggattatcgatctcggaccggaaggaggcaaggaaggtggtcgtgtg
atagcgacaggaacaccgcaggatatcgcttcggcagccgattcccataccggacggttt
ctcgcaatggaactgaaccgctga
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