Prosthecochloris sp. HL-130-GSB: B9H02_06570
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Entry
B9H02_06570 CDS
T04847
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prs
Prosthecochloris sp. HL-130-GSB
Pathway
prs03030
DNA replication
prs03430
Mismatch repair
prs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B9H02_06570
03430 Mismatch repair
B9H02_06570
03440 Homologous recombination
B9H02_06570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prs03032
]
B9H02_06570
03400 DNA repair and recombination proteins [BR:
prs03400
]
B9H02_06570
Enzymes [BR:
prs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B9H02_06570
DNA replication proteins [BR:
prs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B9H02_06570
DNA repair and recombination proteins [BR:
prs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B9H02_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ARM31025
LinkDB
All DBs
Position
complement(1370788..1374351)
Genome browser
AA seq
1187 aa
AA seq
DB search
MDFVHLHTHTHYSMQSSPVFPQELFAACSRLGMKSVAVTDYSAMFNMPELFSLARDAGVK
LIIGSEVYLLEQDAYHNGRHAVSPTLVLLVENEAGYRNLCVLLSRAARDGFVNGMPHVDS
ELFERYHEGLVCLSGYYAGRVGRALLAGNYEEAKSFSSYYHDIFGDNFYLELQRHHTRFD
DKLNEDTVRLAREQGIGLVATNNVHYLEKKDSGRYRAMVAIRTKERLSSSGLQCLPNSEN
YFKSPEEMGELFSDEHRELTNTALIAERCNYSFHQHDPRLPHFPVPEGFADESDYLRHLT
YEGARKKYADPESQGLTWQQVEDRIEKELGVITSMGFSSYFLIVSDLIAASRKMGYSVGP
GRGSAAGSIIAYLTGITRIDPLKYKLLFERFLNPERLSMPDIDIDFTPVGKQKVLDYTVE
TYGTESVAKVVAIGTLGARAAIRDAGRVLEVPLQVVDRLAKLVPSRPGTTLRQGLDEVRE
LRELVESSPQNSTLMEYALALEGRARNVSMHAGAVVITDGPLEEQVPLYVSNKIETEARK
FADEYNAEELERGAQKSSSDEKQVVTQFDKNWIETAGLLKIDYLGLETLAVIDETLHLIK
KRHGADIDLESVPMDDRKTFRIFQEGKMAGIFQFESQGMQNYMMQLQPTQIGDIIAMSAL
YRPGALNARIDAKRNAVDLFVDRKHNREPIDYMHPMLEEILKETYGVIVYQEQVMQISQV
MGGFSLAKADNLRKAMGKKKPEIMQKFKADFVEGAVNQGVHDKLANRIFDLMAEFAGYGF
NKSHSAAYGVLAYWTAYLKAHYPAEFMTAILNSEIGDTSRMKHLTDEARTFNIAVLPPDV
NTSDALFSIEDIDGKPAIRVGLSAIKQVGNGARAVVTARLRRKKPFANLFDLTASVDLRA
MNRKALECLILSGSLDSIEPNRARLLANVDKAIKFGQMQNKSVTLGQCGFFSDDTADGLQ
ESLYPDMDNADPLPDSEKLQAEKKLVGFYLSRHPLDPYRRDWEAFANLHLDARQVQPSRQ
YKVIGVVVSTKPHQDRKGNQMLFGVIEDFTGKADFTIFASIYEQCRHLIRVDETVMLVVE
AETGGGMLKLLVREVVPIKKVRESCIDKVVLRVNADDPGELERLQAVSKVFQEHKGGTAV
DFEVRIPAGDNIEKLHVFARATPIEASDETLAALENILGPDNVRISG
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgcatctacatacccatacccattattcgatgcagagcagccctgtcttt
ccccaggaactgtttgctgcgtgcagcaggctggggatgaagagcgtagctgtcacggat
tattctgccatgttcaacatgcctgagctgttcagccttgccagggatgcaggggtgaaa
ctcattatcggaagcgaagtgtatctgctcgagcaggatgcttaccataatggacgtcat
gcagtctctcctacacttgtcctgcttgtggagaacgaggccgggtaccgtaacctctgt
gtgcttctttcacgtgcagcaagagacggttttgtcaacggtatgcctcatgtggacagc
gagcttttcgaacgctatcatgaggggcttgtatgtctttcggggtactatgccggcagg
gtcggacgagcactgcttgccgggaattatgaagaagccaaatccttttcttcatactat
cacgatatattcggcgacaatttctatctcgagctgcagcgtcaccatacccgttttgac
gacaaactcaatgaagatactgtgcgcctggcccgtgagcagggtatcggacttgttgct
acaaacaatgtgcattacctggagaagaaggattcagggcgctacagggctatggtcgcg
atcaggacaaaggagcggctgtcaagttccggtctgcagtgcctccccaacagtgagaat
tacttcaaatctcctgaagaaatgggtgagctgttcagtgacgaacatcgggagctgacc
aatactgcgcttatcgccgaacggtgcaactattcctttcaccagcacgatcctcggctt
cctcattttccggtgcccgaagggtttgctgacgaatcggattacctgcggcatctcacc
tatgagggagcgcggaaaaaatatgcggacccggaatcccagggccttacctggcagcag
gtagaggaccggatagagaaggagcttggtgtcataaccagtatggggttcagttcttac
ttcctcattgtcagtgacctgatcgccgcatcgaggaaaatgggttattcggtcggtccg
ggaagagggtccgctgcgggaagcattatagcgtacctgaccgggattacccgcatcgat
cctttgaaatacaagcttctgttcgagcgttttctcaatcctgagaggctgtcgatgcct
gatatcgatattgatttcacacctgtcggaaaacagaaggttctcgattacaccgtagag
acctacgggacagaaagtgtcgccaaggtggtcgctatcggtacgcttggtgcccgggca
gctatcagggatgctggcagggtactcgaagtccctcttcaggtagtcgaccggcttgcc
aaacttgttccttcccgtccaggcacgacgttgcgccagggtcttgacgaagtccgtgag
ctccgtgaacttgtcgagagctcaccccagaacagtacactgatggagtatgctcttgcc
ctcgagggcagggcaaggaatgtttcgatgcacgccggggccgtagtgattaccgacggg
ccgctcgaggagcaggtgccgctgtatgtgtcgaacaaaatcgagaccgaggcgagaaaa
tttgccgatgagtacaacgccgaggaactcgagcgcggtgcgcagaaaagcagcagcgat
gaaaaacaggtcgtgacacagtttgacaaaaactggatcgagacagctggcctgctgaaa
atcgattatctcggccttgaaacacttgccgtaatcgatgagacccttcacctgataaag
aagcgtcatggtgcagatatcgatctcgagtctgttccgatggatgacaggaagacattc
aggattttccaggaaggtaaaatggccgggattttccagttcgagtcacagggaatgcag
aattacatgatgcagctccagccgacacagattggtgatatcatcgcgatgagcgcgctt
tatcgccccggagcgctcaatgcccggatcgatgcaaaacgaaacgctgtggatctgttc
gtcgaccggaaacataaccgcgagcctatcgactacatgcatcccatgctcgaggagatc
ctgaaggaaacatacggcgttattgtctaccaggagcaggtgatgcagatctctcaggtt
atgggcgggttttcccttgccaaggctgacaaccttcgaaaggcgatggggaagaagaag
ccggagatcatgcagaaattcaaggccgattttgtcgaaggagcggtaaaccagggagtt
cacgataaactggcaaaccggattttcgatctcatggcggaatttgccggatacgggttc
aacaaaagccattctgcagcctacggtgttctggcctactggactgcatacctcaaggct
cattatccggccgagttcatgaccgcgatcctcaacagtgagatcggtgatacttcgcgt
atgaagcatctcaccgacgaggcccgtacgttcaatatcgcagtgcttccgccggatgtc
aataccagtgatgcgctgttctcgatcgaggatatcgacggtaagccggccatcagggtc
gggttgagcgctatcaagcaggtgggtaatggcgcccgtgctgtcgttaccgcccgtctg
cggcgtaagaagccgtttgccaatctgtttgaccttaccgcatcggtcgatttgcgtgcc
atgaaccgcaaagctctcgagtgtcttatcctttcgggcagcctggacagcatcgaaccc
aatcgggccaggcttcttgccaatgtcgacaaggctatcaaattcggccagatgcagaac
aagtccgtcacgctcgggcagtgtggttttttttccgatgatactgcagacggcctgcag
gaatcattgtatcctgacatggacaatgctgatcctctgcccgattcagagaagctccag
gcggaaaaaaagcttgtggggttttatctcagtcgtcatcccctcgatccgtaccgccgc
gactgggaggcgttcgcaaaccttcatctcgatgcaagacaggtgcagccatcccgccag
tacaaggtgatcggtgtcgtggtgtcgaccaagcctcaccaggaccgcaagggaaaccag
atgctgtttggtgtgatagaggattttaccggaaaggccgatttcacgatttttgccagt
atctacgaacagtgccgccatctgatccgggtggatgagacggttatgcttgttgtagaa
gctgaaaccgggggcgggatgctcaagctgcttgtcagggaggtcgtgccgataaaaaaa
gtccgggaaagctgcattgacaaggttgtactcagggtcaacgccgatgatcccggagag
ctcgaaagacttcaggctgtcagcaaggttttccaggagcacaaaggtggtaccgctgta
gactttgaagtgcggatacctgcaggtgataacatcgagaagcttcatgtgtttgccaga
gctaccccgattgaagccagtgatgaaaccctggccgcactcgagaacattctcggtcct
gacaatgtgcgtatttcgggttga
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