Prosthecochloris sp. HL-130-GSB: B9H02_08205
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Entry
B9H02_08205 CDS
T04847
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
prs
Prosthecochloris sp. HL-130-GSB
Pathway
prs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B9H02_08205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prs03400
]
B9H02_08205
DNA repair and recombination proteins [BR:
prs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B9H02_08205
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B9H02_08205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_16
AAA_29
AAA_21
UvrA_inter
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND1
AAA_25
nSTAND3
AAA_18
NACHT
MMR_HSR1
cobW
Viral_helicase1
Septin
Motif
Other DBs
NCBI-ProteinID:
ARM31278
LinkDB
All DBs
Position
complement(1733808..1736660)
Genome browser
AA seq
950 aa
AA seq
DB search
MSNKENNPAGGSDNRLPDIVLRGVCTHNLKNISVRIPRNRFVVLTGLSGSGKSSLAFDTL
YAEGHRRYVESMSSYIRQFLERMPKPDIEAIDGIAPAIAIEQKALPKNPRSTVGTVSEIY
DYLRLLYARIGKIYSPDTNELVLKHTPEDVRLQVDFLEEGTACYAGFPFPCHSTFSSAAC
PVGEELQNLLQKGFFRLLIQDVMVDIGDEKERNRIAAFSRKDLQDVMVVVDRFKVKHDEA
LSSRIVQAAETCFGESGGYAWLKVRDGKLYRFSEKLELNGIEYQEPSPQLFAFNSPLGAC
PECQGFGRIAGIDEDAVVPDKSLSLREGALACWRSEKYSRYSKKLLDIAPEVGIDVDTPY
EKLPAAHKELIWKGIPRKGYTGLWTFFSELEKDAGYKVHLRVFLSRYRGYATCSACEGSR
LKPEARYVKISGRDLGQVTRMNIAEAFEFFEHLDISPFDQKVAGAVLIEIRKRLKYMLDV
GLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAMYILDEPSIGLHQSDSARLIDLLKR
LRDLGNTVVVVEHDREIIEAADEIIDLGPRAGRLGGEVVFHGPPEEIRSAVTSLTADYLS
GRKRIPVPAARRSADWDRAIEVKGAMQNNLKNIDVLLPLGVMTCVTGVSGSGKSTLVNDI
VRKGIARAKEQTTEKVGTHRSISGIEHIQRVEHVDQSPIGKSSRSNPATYLKIFDDIRQL
FAQTGEARARGWKPGYFSFNIPGGRCETCSGEGVVRIEMQFLADIEAECEECHGRRYKAE
TLEILYNGRSIADVLDMTVEEALGFFAGEKSIERKLRVLDDVGLGYIRLGQSSSTLSGGE
AQRLKLAGFISRSDISETLFIFDEPTTGLHFDDILKLIRCFEQLLVQNNSLLVIEHNPDI
IKQADWIVDLGPGAGDRGGEVVATGTPEEICDASRSVTGRHLRPWLRGDL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaggagaataacccggctggagggagtgacaacagactgcccgatattgtt
ctcaggggggtatgtactcacaacctcaagaatatttcggttcgtatcccgcgcaacagg
tttgtggttctgaccggcctgagtggttcagggaagtccagtcttgcctttgatacgttg
tatgccgaggggcaccgtcgttatgtcgagtcgatgtcatcctatatcaggcagtttctg
gaacggatgcccaagccagatatcgaagccattgacggcattgcgcctgctatcgctatc
gaacagaaggcgctgccgaagaatccccgttcgacagtcggcacggtatcggaaatctat
gactacctgcgtcttctttatgcccgtatcgggaaaatctactctccggataccaatgaa
cttgttctgaagcatactcccgaggatgtccgtctccaggtggattttctcgaagaggga
actgcctgttatgcaggttttccgtttccctgtcattccaccttttcctcagctgcatgt
cctgtcggggaggaattgcagaacctgcttcaaaaagggtttttccgtcttctgatccaa
gacgtgatggtcgatataggcgacgagaaggagcggaatcgtattgcggcattcagccgc
aaggatcttcaggatgtcatggttgtggtggatcgtttcaaggtgaagcatgacgaagcc
ttgtcgagcaggattgtccaggcggctgaaacctgtttcggggaatcgggaggctacgca
tggctgaaggtccgggacgggaaactctaccggttcagtgaaaagctcgaactgaacggt
atcgaataccaggagccctcacctcagctttttgcattcaactctcctctcggggcatgc
ccggagtgccaggggttcggcagaattgcaggaattgacgaggatgcagtcgtgcccgac
aagtcactctcccttcgtgaaggggccctggcatgctggaggtcggaaaaatacagcagg
tactcgaaaaaactgcttgatatagcgccggaagtgggaatcgatgtggatactccctac
gaaaaacttcctgctgcgcataaagagctcatttggaaaggtattccccgaaaaggctat
acagggttatggacgtttttttccgagctggaaaaggatgcgggttacaaagtccatctg
agggtctttctcagcaggtatcgtggttatgccacctgttcggcctgtgagggaagccgg
ctcaagcctgaagcgcgatatgtgaagatatccggcagggatctcgggcaggtgaccagg
atgaacatagccgaagcattcgagtttttcgaacatctcgatatctcacctttcgatcag
aaagttgccggagctgttctgatcgagattcgcaaacgcctgaaatacatgctcgatgta
gggcttgattatctcacgctggatcgtcttacccataccctcagcggcggtgaattccag
cgtattaatctctctacatctcttggatcgccccttgtcggtgcaatgtatatccttgac
gaacccagcatcgggctgcaccagagtgattctgcacgattgatcgacctgctcaagcgg
ctccgggatctcggcaatacggttgtcgttgtcgagcatgatcgagagattatcgaggcc
gcagatgaaattatcgatcttggtccccgtgcgggtcgtctgggtggagaagtggtgttt
cacggccctcccgaagagatccgttccgccgtgacatccctgactgctgattatctcagt
gggagaaaacgcattcctgttcctgcagcgcgacgctctgctgactgggaccgtgccata
gaggtcaaaggtgcaatgcagaataacctgaaaaacatcgatgtacttctgccgttaggc
gtcatgacctgtgtgacgggggtgagcggatcgggcaagtcaacccttgtcaatgacatt
gtcaggaaggggattgccagggcaaaggaacagacaaccgaaaaggtcggaacgcaccgc
tcgatcagcggtatcgagcatatacagagagtcgagcatgtcgaccagtcacctatcggc
aagtccagcaggagcaacccggcgacctatctcaagattttcgacgatatccggcagctt
tttgcccagaccggagaggccagggcacgtggatggaagccgggatatttttctttcaac
attcccggtggacgctgtgaaacctgttcaggcgaaggtgtcgtgagaatagaaatgcag
tttcttgccgatattgaagctgagtgcgaagagtgccatggacggcgttacaaagccgag
acgctcgaaatactctacaacggccgttccattgcagatgtacttgacatgacggtggaa
gaagcgctcggtttttttgctggtgaaaagtccatcgagcgcaaactgcgtgtgctcgat
gatgtggggcttggttatatacgtctggggcagtcctcgagtacattgtcgggcggtgag
gcacagaggctgaagcttgcgggctttatttcacggtcggacatctccgagactctcttt
atcttcgacgagccgacaaccggcctgcatttcgatgatattctcaagctgatcaggtgc
ttcgagcagcttctcgtacagaacaattcactgctggttatcgagcataatccggatatt
atcaagcaggctgactggattgtcgatctcggaccaggcgcaggagatcgtggcggagag
gttgtcgcgacaggaacaccagaggaaatatgcgatgccagccggtcagtgaccggccga
catttgcgcccctggctcagaggggatttgtag
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