Prosthecochloris sp. HL-130-GSB: B9H02_08280
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Entry
B9H02_08280 CDS
T04847
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prs
Prosthecochloris sp. HL-130-GSB
Pathway
prs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B9H02_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prs03400
]
B9H02_08280
Enzymes [BR:
prs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B9H02_08280
DNA repair and recombination proteins [BR:
prs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B9H02_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
NTPase_1
RsgA_GTPase
nSTAND3
SLFN-g3_helicase
AAA_16
NPHP3_N
HHH_2
AAA_22
MeaB
TrwB_AAD_bind
T2SSE
ABC_tran
AAA_28
cobW
UvrD-helicase
UvrD_C
TraI_hel_assoc_N
DnaB_C
NACHT
MobB
DEAD
KAP_NTPase
SRP54
AAA_29
AAA
AAA_5
AAA_26
ATPase_2
MMR_HSR1
ATP_bind_1
NB-ARC
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ARM31289
LinkDB
All DBs
Position
complement(1754371..1756575)
Genome browser
AA seq
734 aa
AA seq
DB search
MPEHEGAYREEEQNISGLVERVVFHSDETGFSVLRVRHDDDEESATVTGMLPSVTAGDYV
EGAGSWVHDRKYGLQFQSTGLLVVSPATRDGIERYLASGMVRGIGTHFARQLVRAFGENV
FSVIEHEPERLLELPGIGRKRMKMVVEAWDEQKIVRDIMVFLQSHGVGTARAVRIFKTYG
ERAIEVVSSNPYRLVLDIQGIGFKTADTIAERLGIARDSVVRAQAGIRHIMQELSGEGHC
AITVHRLIEKSAELLSVSGELIQNALKEETIRGGIVREDIDGEECYFPAALFRAESAVAS
RIADLCRGDVPWGEIDAEEEAQRLEEESGFSLSASQKDALRLALHSKLLVITGGPGVGKT
TLVNSILSVVRQKEVRVALCAPTGRAAKRLSESAGMEAKTIHRLLEFDPASFDFKHSMTN
PLKADLVIVDEASMIDVVLMQKLLLAVPDDAALIVVGDVDQLPSVGPGAVLSDIISSGVV
PVVRLREIFRQAAESRIIVNAHRINEGKLPLNPEGEGLSDFYLVNSPRPEDIFSKLMQVV
LERIPARFGFDPLRDIQVLTPMNKGGLGTGSLNSALQKALNPESQDGISRFGTVFAPGDK
VIQQVNNYDKEVFNGDIGLVTALDRDESILTVSFGAHEVDYEFGELDELALAYAITIHKS
QGSEYPVVVIPLCMQHYMLLKRNLLYTAVTRGRKLVMIIAEQQAISRSVRELSGGGRLTN
LAQRISDRSREQSA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacatgaaggagcatacagagaagaagaacagaacatttccgggctggtcgaa
cgggtcgtgtttcacagcgatgagaccggtttcagtgtgctgagggtaaggcatgatgac
gatgaagagtccgctaccgttaccggtatgctgccatcggttactgcaggagattacgtg
gaaggggctggcagctgggtccatgaccgcaaatacggtctgcagttccagtcaaccggt
ttacttgtcgtttctcccgcgacgcgtgacggcatcgaacgctaccttgcatcgggaatg
gtacgtggcatcggaacccattttgccaggcagctggtaagggcgttcggtgagaatgtg
ttttcggtgatcgagcatgagcccgagcggctgctcgagcttccgggcatcggcagaaag
cggatgaaaatggttgtggaggcctgggatgaacagaaaattgtgcgggatatcatggtt
tttcttcagtcgcacggtgtgggtacagcgcgtgcggtaagaattttcaaaacctatggt
gaacgggcgatcgaggtggtcagcagcaatccctatcgcctggtgctcgatatacagggg
atagggttcaagaccgctgataccatcgctgaacgcctgggcattgcccgagattcggtg
gttcgggcacaggccggtatccggcatattatgcaagagctttccggtgaggggcattgt
gccattaccgtgcacaggttgattgaaaaatcggctgaacttctctctgtttccggagaa
ttgatccagaacgcgttgaaggaggagacgatccggggcggtattgttcgggaggatatc
gatggtgaagagtgttattttcctgcagctcttttcagggcggaaagtgccgtagcctca
aggattgcagacttgtgccggggagatgtgccatggggtgagattgatgctgaagaggag
gctcagaggctggaggaggagagcggttttagcctttcagcatcccagaaagatgctctc
agacttgcactgcacagcaagctgctcgtgattaccggtggacccggtgtgggtaagacg
acgcttgtcaattcgatcctttctgtcgttcgccagaaagaggtacgtgttgcattgtgc
gccccgacgggaagggcggcaaagcggttatcggaatcggccggaatggaagcaaaaacc
attcatcgtctgcttgaattcgatcctgcaagttttgacttcaagcattcgatgaccaat
cctctcaaagcagatcttgtcatcgtcgacgaagcctcgatgatcgatgtcgtgctgatg
cagaaactgctgcttgcggtccctgacgatgccgcgctcattgttgtcggtgatgtcgac
cagctgccttctgtaggacccggagcggtgctttcggatattatcagtagtggggtggtg
ccggttgtccggctcagggagatatttcgccaggctgcagagtcacgtattattgtcaat
gcacatcgtatcaatgaaggaaagcttccgctcaatcccgaaggtgaaggcctttcggat
ttttacctggtaaactctccgcgtccggaagatattttttccaaactcatgcaggtggtg
ctcgagcgtattccagcgcgtttcggattcgatcctctgcgggatattcaggtcctgacc
cctatgaacaagggagggcttggtaccggatcgctcaacagtgccctgcagaaagctctc
aatccggagagccaggatggaatcagccgttttggaactgtttttgcccctggagacaag
gtgatccagcaggtcaacaattacgataaagaggtgttcaatggtgatatcggcctggtg
acagcgctcgatcgtgatgaaagcattctgacggtgtcatttggtgctcatgaagtcgac
tatgagttcggagagctcgatgagctggcgcttgcctatgcaattaccattcacaagagc
cagggatccgagtatcctgtggttgtcatacccctgtgcatgcagcattatatgctgttg
aagcggaacctgctgtatactgccgtgacaagaggtcgaaagctcgtgatgattattgcc
gaacagcaggcgatatcgcgctccgtaagagaactgtccggcggtgggcgtttgacaaat
cttgcacaacggatcagtgacaggtcaagagaacagtctgcctga
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