Prosthecochloris sp. HL-130-GSB: B9H02_09220
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Entry
B9H02_09220 CDS
T04847
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
prs
Prosthecochloris sp. HL-130-GSB
Pathway
prs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B9H02_09220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prs03021
]
B9H02_09220
Transcription machinery [BR:
prs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B9H02_09220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ARM31446
LinkDB
All DBs
Position
complement(1955621..1956520)
Genome browser
AA seq
299 aa
AA seq
DB search
MRQLKISKQITNRESLSLDRYLQEIGKYELLTAEDEVKLTRAIKEGYDMPVDTPEYKRAK
RALDKLIKGNLRFVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETRGFKFISYAVW
WIRQSILQALAEQSRIVRLPLNRVGTLNKISKAYSQLEQEYERDPNTKELANVLDMDSQD
VADTLKIAGRHVSVDAPFAQGDDNRLLDVLQHDGQKPDYSLTKDSLTLEVERSLSVLAPR
EADVIRSYFGIGMENPLTLEEIGEKFKLTRERVRQIKEKAIRRLRQSAYSKVLKEYIGS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactaaaaatcagtaagcagatcaccaatcgtgagagcctgtctctcgaccgc
tatctgcaggagatcgggaagtatgagctcctgaccgcagaagatgaagtcaaactgact
cgtgcgatcaaggaaggatacgatatgccggttgatacaccggagtacaaaagggcgaaa
agggcactggacaagcttatcaagggcaatctgaggtttgtcgtttccgttgccaaacag
taccagaaccaggggttgacgcttggtgatctcatcaacgaaggcaacctcggcctgatc
aaggcagccaaaaggttcgacgaaacaagagggttcaaatttatctcgtacgcagtatgg
tggatccgccagtccattctgcaggcactggcagaacagtcgaggattgtccgtcttccg
ctcaaccgtgtaggcaccctgaacaaaatcagcaaggcatacagccagctcgagcaggag
tacgagcgggatcccaatacaaaagagctcgccaatgtgcttgacatggattcacaggac
gtggcagataccctcaagatagccggtcgtcatgtttccgtagacgctccatttgcccag
ggggatgacaaccgtcttctcgacgtgcttcagcatgacggtcagaagccggactacagc
cttaccaaggattccctgacgctggaagtggagcgttcactctctgttctggcccctcgc
gaagccgacgtgatccgttcatatttcgggatcggtatggaaaaccctctgacgctcgag
gagataggggaaaagttcaagctgacacgtgaacgtgtccgccagatcaaggagaaagcc
atcaggcgtcttcgccagtcagcctacagcaaggttctcaaagagtatatcggcagttga
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