Planococcus rifietoensis: AUC31_00220
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Entry
AUC31_00220 CDS
T04201
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prt
Planococcus rifietoensis
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prt03016
]
AUC31_00220 (truB)
Enzymes [BR:
prt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AUC31_00220 (truB)
Transfer RNA biogenesis [BR:
prt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUC31_00220 (truB)
Prokaryotic type
AUC31_00220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALS73765
UniProt:
A0A0U2Z9J3
LinkDB
All DBs
Position
complement(1690998..1691927)
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AA seq
309 aa
AA seq
DB search
MEPNGILPLWKEPGMTSHDCVFRLRKILKTKKVGHTGTLDPQVDGVLPICLGRSTKVAEY
ITDQGKTYEAEVMIGLSTETEDAEGAIVEQDASDKTISREQLEDVLQSLTGDIKQIPPMY
SAVKVNGRKLYEYARKGETVERPVRTVHIDSIELLDEEDSWQGQHIRFRIRIRCGKGTYI
RTLAVQIGEALGYPAHMSRLTRTQSGSFSKEQCVTLAEVEEIAQNGDIGSILQPLAYGLS
AFPFEEITPDLLFGIKNGQVLEEHPVLKTEPFVVFTYQGRPAALYKRHPDKPGKMKPEKM
FGFPPTDEV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatgggattcttccattatggaaagagccgggcatgacatcgcatgattgt
gttttccgcttgcggaaaatcttgaaaacaaaaaaagtcgggcataccgggacacttgat
ccccaagtcgacggcgtattgccgatttgcctcggacgatcgaccaaagtggcagagtat
atcactgatcaaggaaaaacctacgaagcggaagtaatgatcggactttcaacggaaacg
gaagatgcagaaggcgcaatagttgaacaggacgcgagtgataaaacgatttcacgagag
cagcttgaagatgtactgcaaagcttgaccggtgacattaaacaaatcccgccgatgtat
tctgccgtcaaagtgaacggcagaaaactttatgaatatgcgcgcaaaggcgaaacggtg
gagcggccggtgcggactgtgcatattgactcaatcgaattattggatgaagaggacagt
tggcaaggacaacatatccgtttccgcatccgcatccgttgcggaaaaggcacctatatc
cgaacgcttgccgtccagatcggggaagcacttggctatccggcccatatgtcacgactc
acgcgcacgcaatcgggcagtttttcgaaagaacaatgtgtgacgcttgccgaagtggag
gaaattgcgcaaaatggggatatcggttctattttgcagccccttgcctatggcttaagt
gcgtttcctttcgaagaaatcacgccggatttattgttcggcattaaaaacggccaagtt
ctcgaggagcatccggtcttgaagacggaaccattcgtcgttttcacctatcaaggcaga
ccggcagcgttgtataaacggcatccggataagccgggcaaaatgaaacccgaaaaaatg
tttggatttcctccaacggacgaggtgtag
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integrated database retrieval system
