Planococcus rifietoensis: AUC31_00235
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Entry
AUC31_00235 CDS
T04201
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUC31_00235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prt03019
]
AUC31_00235
03016 Transfer RNA biogenesis [BR:
prt03016
]
AUC31_00235
Enzymes [BR:
prt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AUC31_00235
Messenger RNA biogenesis [BR:
prt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AUC31_00235
Transfer RNA biogenesis [BR:
prt03016
]
Prokaryotic type
tRNA degradation factors
AUC31_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
OB_RRP5_4th
S1_RRP5
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ALS73768
UniProt:
A0A0U2XMP1
LinkDB
All DBs
Position
complement(1687403..1689511)
Genome browser
AA seq
702 aa
AA seq
DB search
MEQTKKVYTFDWAGRELKVEVGQLAKQANGAALIRYGDTAVLSTATASKSPKPLDFFPLT
VNYEERQYAVGKIPGGFIKREGRPSEKATLISRLIDRPLRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLALMISDIPFDGPIAGVIVGMVDGEYIINPTGEQMEKSSINLTVA
GTKDAINMVEAGAKEVSEEVILEAIMFGHEEIKKLIAFQEEIAAEVAKEKSAVQLYELDA
DLTADLKTAVEADMNAAVQVNEKQARNEAIAAVRERALEAYADSEDDIKKQAGQVLDKMV
KDEVRRLITDEKIRPDGRGPSEIRALSSEVGVLARTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGLEETKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKKGENYTVLSDI
QGMEDHLGDMDFKVAGTAEGVTALQMDIKIDGLSREILEEALTQAKIGRLHILESMIATI
NTPRTTLSKFAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQDGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGAVKRIEKFGAFVELFPGKDGLLHISEIQEERTKE
VEDVLKMGDIIKVKVIEIDRQGRVNLSRKTVLKEEKEAAEKA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacaaaaaaggtttacacatttgactgggctggccgcgaactgaaggttgaa
gtcggtcaactggcaaaacaagcaaacggagcggcattgatccgttatggcgatacagca
gtgctgtccactgcaaccgcatcaaaatcaccgaagcctttggatttcttcccgctgacg
gtgaactacgaagagcgccaatacgctgtcgggaaaatcccgggcggtttcattaaacgc
gaaggacgcccatccgaaaaagcgacattgatcagccgcttgatcgaccgtccgttgcgc
ccgttattcccagacggattccgcaacgaagtacaggtcatttcaatggttatgtccgtc
gaccaggattgcccatctgaaatggcagcaatgttcgggtcttccttagcattgatgatt
tcagacattccatttgacgggccgatcgcgggcgtcatcgtcgggatggttgatggcgag
tacatcatcaacccaacaggcgagcaaatggagaaaagctcgatcaacttgacggttgcc
ggtacgaaagacgccatcaatatggtagaagccggtgccaaagaagtgtccgaagaagtg
attcttgaagcgatcatgttcggccacgaagaaatcaagaaattgatcgctttccaggaa
gagatcgctgcagaagtagccaaagaaaaatcagcagttcaactatacgaactggacgct
gacttgacggctgatctgaaaacagctgtggaagcagacatgaatgctgccgttcaagtg
aacgaaaaacaggcacgcaatgaagccattgcagctgtccgcgaacgtgcgcttgaagca
tacgcagattcggaagacgatatcaagaaacaagcgggccaagtgctcgataaaatggtc
aaagatgaagttcgtcgcctgattaccgatgaaaagattcgcccggacggccgcggccca
tctgaaatccgtgcgctttcttctgaagttggcgtccttgcgcgcactcacggctccggc
ctctttacacgcgggcaaacgcaagcgatgagcatctgtacgctaggcgctctcggcgat
gtgcaaatcatcgatggcctcggcttggaagagacgaagcgttttatgcaccattataat
ttcccgttgttctccgttggggaaaccggcttcttgcgcggccccggccgacgcgaaatt
ggccacggcgctctaggtgaacgtgcgcttgaagcagtcattccaaatgagaaagatttc
ccttatacgatccgcctggtctccgaggtattggaatcgaacggatccacatcacaagca
agtatctgtgcatctactttggcgatgatggatgcaggtgtgccaattaaagcacctgtt
gccggaatcgcgatgggccttgtgaaaaaaggcgagaactacacggttctttccgatatc
caagggatggaagaccatctcggcgatatggactttaaagtcgctggaacggcagaaggc
gtcacagccttgcagatggatatcaaaatcgacggcttgtcccgcgagatcttagaagaa
gcattgacgcaagcgaaaatcggccgtttgcacattctcgaatcgatgattgctacaatc
aatacaccacgcacgactttgtcgaaatttgcgccgaagatcatcatggtgaaaatcaat
ccggataagatccgtgacgtcatcgggcctggcggaaaagtcatcaataaaatcattgat
gaaacaggcgtcaagattgataccgaacaagacggcacgattttcatctcttctgttgat
gaagaaatgaacgccaaagcgaaagcgatgatcgagaatatcgtacgcgaagcgaaagtc
ggcgaatattacgaaggcgcagtcaagcgcatcgaaaaattcggcgcattcgttgaattg
ttccctggcaaagacgggcttctccatatttctgaaatccaggaagagcggacgaaagaa
gtggaagatgtcttgaagatgggcgatatcatcaaagtcaaagtcatcgaaatcgaccgc
caaggacgcgtcaacttgtcccgtaaaacggttttgaaagaagaaaaagaagcagccgaa
aaggcttga
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