KEGG   Planococcus rifietoensis: AUC31_00325
Entry
AUC31_00325       CDS       T04201                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
prt  Planococcus rifietoensis
Pathway
prt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AUC31_00325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prt03019]
    AUC31_00325
Messenger RNA biogenesis [BR:prt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AUC31_00325
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_2 KH_NusA_2nd MctB GAGA_bind
Other DBs
NCBI-ProteinID: ALS73785
UniProt: A0A0U2N2N2
LinkDB
Position
complement(1664579..1666138)
AA seq 519 aa
MGITEFIFALLGIIVGVVVGYFALKKANDSKMAGAKHSAEQVVEDAKREAEALKKEALLE
AKDENHKLRTEAESEIRERRSEMQKHENRLLQREENLDRKDDALNKREAGLERKDQALAE
KQQHIEQMESKAENLVQQQQTEMERISSLTREEAKSIILEQVENELSTDIAVMVKESEAR
AKEESDKKAKNILSLAMQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALEKLVSDGRIHPARIEEMVEKSRREVDEQIRE
IGEQTTFDVGVHNLHPDLIKILGRLRYRTSYGQNVLKHSVEVAFLSGLMAAELGEDVTLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELGTKYKEHPVVINSIASHHGDTEATSVISVIVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREIRIMVRPEQIDD
MTAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgggtattactgagttcatcttcgctttgcttggtatcatcgtcggtgtagttgttggg
tattttgcattgaaaaaggcaaacgattccaaaatggcaggcgccaaacattccgcagag
caagtcgtcgaagatgcaaaacgggaagcagaggcgctaaagaaagaagccttgctggaa
gcgaaagacgaaaatcataaattgcgtactgaagctgaatctgaaattcgcgaacgccga
tcggaaatgcagaaacatgaaaatcggttgttgcaaagagaagaaaatttggatcgcaag
gatgatgcattaaacaaacgcgaggccggccttgaacgcaaggatcaggctcttgccgaa
aaacaacagcatattgaacagatggagagcaaagctgagaatttggttcagcagcaacaa
accgaaatggaacggatttcatctttgacacgcgaagaagcgaaaagcatcattctcgag
caagtggagaatgaattgtcgacagacatcgccgtcatggtcaaggaatcggaagcccgt
gccaaagaagaatcggataaaaaagcgaagaacatcttgtctctcgcgatgcagcgcttt
gctgcagaccatgtagcggaaacgactgtttctgtggtcaacttgccgaatgacgagatg
aaaggccgcatcatcgggcgtgaaggacgcaatatccggacgcttgaaaccttgaccggt
atcgatttgattatcgatgacacgccggaagcggtcattctttccggatttgatccgatc
cgccgcgaaacagcgcgtctggcacttgagaaactggtgtcggacgggcgcatccatcca
gcgagaatcgaggaaatggttgagaagtcaagacgtgaagtcgatgaacaaattcgtgaa
attggggaacaaaccacatttgacgtaggtgtacataacttgcatccagacttgatcaaa
atactcggtcgactccgctaccgtacaagctatggccagaacgtcctgaaacactcagtg
gaagtggcattcttgtcaggccttatggcagcagagcttggagaagatgtgacacttgca
cgacgcgcaggtctcttgcacgatattggcaaagccatcgaccacgaagtcgaaggcagc
catgtggaaatcggcgtcgagctcggaacgaaatacaaggaacatccagtcgtcatcaac
agcattgcttcccaccacggcgatacagaagcgacttcggtcatttcggtcatcgtcgca
gcagcggatgcactatccgcggctcgtccaggtgccagaagcgaaacgctcgagaactac
atccgccggcttgagaagctggaagagatttcagagtcttatgaaggggtcgagaaatcg
ttcgccatccaagcaggccgcgaaatccggatcatggttcgtccagagcagatcgacgat
atgacagctcaccgccttgcacgcgatatccgcaagcgcattgaggaagaattggattat
ccaggacatatcaaagtgacggtcatccgcgaaacgcgcgccgttgaatacgcaaaataa

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