Planococcus rifietoensis: AUC31_00575
Help
Entry
AUC31_00575 CDS
T04201
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUC31_00575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prt03019
]
AUC31_00575
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_00575
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC31_00575
Messenger RNA biogenesis [BR:
prt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUC31_00575
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUC31_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ALS73834
UniProt:
A0A0U2YGR5
LinkDB
All DBs
Position
complement(1616737..1618164)
Genome browser
AA seq
475 aa
AA seq
DB search
MNLEKLLYEFYGYTEFRPGQKQVIEQVLAGRDVLALLPTGMGKSLCYQLPGKVLPGAVVI
VSPLLSLMQDQVAQLKKMGEKSVIAINSFMKPEDRERAWNTLGTYKFIFVAPEMLVQPYV
LGKLKVLGISLLVADEAHCISQWGFDFRPDYLRIAEVLPQLGNPQTLALTATATDKVTDE
IKRYLKLSDPFVYSHPMDRKNISYDIRKFENDHDKLDALMNLVSEYGGPGIIYAGTRRKS
QELAGRLLTLGGRAAFYHGGMEQQDRIFVQQQFANKELEWVCATNAFGMGVHIPDIRHVI
HFQLPSSIEGYVQEVGRAGRDSLPSLATLLYTAGDERLVESLIMDDLPEKHEIELIYEQG
EKAKQLIEQGMIRETAYRIISYWRERLPLEGTLNQIEQLKKEKQRQAESVRGLVHASGCI
RQYISTSFDQENPAIPTNCCSFHGIDHSLFKGSQSEQKATPQGSWKERLKVLLPI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgaaaaactattgtacgagttttatggctacacggaattccgccccggccaa
aaacaagtaatcgagcaagtgctggcagggcgcgacgtcttggcgctgcttccgaccgga
atgggtaaatctctatgttatcagctgcctgggaaagtcttaccgggcgctgtcgtcatt
gtctcgccgcttttatcgttgatgcaagatcaagttgcccaattgaaaaagatgggggaa
aaatcggttattgctatcaattccttcatgaaaccggaagatcgcgaaagggcgtggaat
acgcttggcacttataaattcatcttcgtagcccccgaaatgcttgtacagccatatgtg
cttggaaaattaaaagtgcttggcatctcattgcttgtcgcggatgaagcgcattgcatt
tctcaatggggctttgatttccgtccggattatttgcgcattgcagaggttctgccccag
cttggcaacccgcaaactttggcattgaccgcaacggcaaccgacaaagtaacagatgaa
atcaagcgttatcttaaattgagtgaccctttcgtctattcacatccgatggaccgaaag
aacatcagttatgatatccgaaaatttgaaaacgatcacgacaagctggacgcgctgatg
aacttggtgtcagaatacggcgggccagggatcatttatgccggcacacggcgcaaatcg
caggagttggctgggcgcttgctcacacttgggggccgggcggctttttatcatggcggc
atggagcagcaggatcgtatatttgtgcagcagcagtttgccaataaggagctcgagtgg
gtatgtgcgaccaatgcattcggcatgggggtccatattcccgatattcgccatgtcatc
catttccaattaccttcttctatagaaggatatgtccaggaagtggggcgtgctggccgg
gattctttgccttcactggcaactttattgtatacagctggggatgagcggctcgtggag
agtttgatcatggacgatttacccgagaaacatgaaatcgaactaatctatgagcagggc
gaaaaagcgaaacaattgattgagcaggggatgataagggaaacggcgtatcgcatcatt
tcctattggcgcgagcgtctgccccttgaaggcacattgaaccagatcgagcaactgaaa
aaagaaaaacaacgtcaagctgaatccgtccgtgggctggtccatgcgagcggttgcatc
cggcaatatatcagtacaagtttcgatcaagaaaaccctgctataccaactaattgctgc
agttttcacggaatcgaccacagcctgttcaaaggcagtcaaagcgaacaaaaagcaact
ccacaaggctcttggaaagagcgtttgaaggtccttctccctatatga
DBGET
integrated database retrieval system
