Planococcus rifietoensis: AUC31_05575
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Entry
AUC31_05575 CDS
T04201
Name
(GenBank) transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
prt
Planococcus rifietoensis
Pathway
prt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AUC31_05575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prt03000
]
AUC31_05575
Transcription factors [BR:
prt03000
]
Prokaryotic type
Helix-turn-helix
Other families
AUC31_05575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
SUCH1_C
HTH_31
DUF4269
Motif
Other DBs
NCBI-ProteinID:
ALS76987
UniProt:
A0A0U2ZAR1
LinkDB
All DBs
Position
640584..641858
Genome browser
AA seq
424 aa
AA seq
DB search
MCYYLYILTKKGEFMNIGSVIKYYRLKHNLTQSQLADGICSVSHLSKIESNTYTPHEETY
EALLLKMGVQLKKELEHQKRLEQQLGRFIDCALHYDLDNLHKIYEELLDEDDYLQSTDLV
NQYELYKFRYYVLDLQMDKASAQQKLLEKLKASFTAPELWMSRFFQALYFTTLGQQKEAM
DLMYRLDQGLQSIPQKLEGEFYYQKARILIVHDRLELSAYFAERAVRSYEMHHNYIRLLH
AQLLLAINYTRRNLSTQAASLYEVVKRNAHLTHQNELYQSVLYNYAELMKSQKQDSQAFE
LFSELKDVVQPGSYIHKAVIVNLLELKGISEEETVELIEQLRMPGTPKDEEYFKLYSDYY
GKREFSQQELLNYKEDKMFPFFKKYGYIKDTKHLSEELAAHYKEQQDWQKAYYYQTQFLE
SDGD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgtgttattatttatatattctgacaaagaaaggtgagtttatgaacatcggttctgtg
attaaatactatcggctcaagcacaacctcacacagtcacagctcgctgatggcatctgt
tccgtatcgcatttgagcaaaatcgaatccaatacctatacgccgcacgaagaaacttac
gaagcgctgcttttaaaaatgggcgtgcaattgaaaaaagaactggaacaccagaagcgg
cttgaacagcaattggggcgttttatcgattgcgcacttcattacgatctcgacaatttg
cataaaatctatgaagagcttttggatgaggacgattacctgcaatcaaccgacctggtg
aatcaatacgaattgtataaattccgctattatgtcctggatttgcagatggacaaagcg
tcagcacagcaaaagctgcttgaaaagctgaaagcttcttttacagcaccggagttatgg
atgagccgtttttttcaagcactttatttcacaactttaggacaacaaaaagaagcaatg
gacttgatgtacaggctagatcaaggacttcaaagcattccgcaaaaactggagggcgaa
ttttattatcaaaaagcgagaattttaatagtgcatgaccgcctggagctgtctgcatat
tttgccgagcgggcagtgcgttcttacgaaatgcatcataattacatccgcctcctgcat
gcgcaattgctgctggcgatcaactacacaaggcgcaatctgagtactcaagccgctagc
ttgtatgaagtggtcaaacgcaacgcccatctgacccatcagaacgaattgtatcaatcg
gttctttataattatgcggagttaatgaagagccagaagcaagacagtcaagcattcgag
ctgttttcggagcttaaagatgtggtgcagccaggaagctatatacacaaagcagttatt
gtcaatttgctggagctaaaagggataagtgaagaagaaacagttgagctgatcgaacaa
ttgcgcatgcctgggaccccaaaagacgaagaatacttcaagctgtatagcgattactac
gggaaacgagaattttcccaacaagaacttttgaactataaagaagataaaatgtttcca
tttttcaaaaaatatggttatataaaagacaccaaacatctttctgaagagcttgcggct
cattacaaagagcagcaagattggcagaaagcctattactaccaaactcaatttctggaa
agcgacggtgattaa
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