Planococcus rifietoensis: AUC31_09035
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Entry
AUC31_09035 CDS
T04201
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
prt
Planococcus rifietoensis
Pathway
prt02020
Two-component system
prt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AUC31_09035
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AUC31_09035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prt03021
]
AUC31_09035
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
prt02035
]
AUC31_09035
Transcription machinery [BR:
prt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUC31_09035
Bacterial motility proteins [BR:
prt02035
]
Flagellar system
Flagellar assembly proteins
Stator
AUC31_09035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
HTH_24
HTH_23
Rv2175c_wHTH
HTH_IclR
CT_C_D
HTH_28
Sigma70_ECF
PriX
Motif
Other DBs
NCBI-ProteinID:
ALS75356
UniProt:
A0A0U2Z876
LinkDB
All DBs
Position
3424225..3424983
Genome browser
AA seq
252 aa
AA seq
DB search
MVNQKLSNAELAQWGNWQQHRDQDAGDYLVAKYLPLVDYVIQRFLISLPKTVDKDEVRSY
AYEGLLDALDKFKPEKDWKFETYAAWRIKGAIIDGLRKSDWLPRSLRDKVKKIEKAYAEL
EQQKGESASDQEVSEYLGMTPAELNRAVSEAALSAMLSMDDDQASVEERMPRASSGSPER
ELSGQMTKEALAKAIATLPEKEKLTVSLCYFEEMKLTEIAEILGLSVSRVSQLHSKAMLR
LHAAMLSVHEHY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaatcagaaattgtcgaatgcagaactagcgcaatggggcaactggcagcagcac
agggaccaggatgccggcgattatttagtcgcgaagtatttgcccttggtggattatgtg
attcaacgctttcttatcagcctgccgaaaaccgtcgacaaagacgaagtccgaagctac
gcctacgaaggcttgctggacgcactcgataaattcaagccggagaaagactggaaattc
gaaacctatgccgcgtggcggatcaaaggggcgatcatcgatggccttcggaaaagcgat
tggctgccgcgttcattgcgggacaaagtgaagaaaatcgagaaagcgtacgccgaactg
gaacaacagaaaggcgaaagtgccagtgaccaggaagtgagcgaatacttggggatgacc
ccggcagaattgaaccgcgctgtctcggaagctgccttgtcggcaatgctgtcgatggat
gacgaccaggcgagcgtggaagaacgcatgccgcgcgccagtagcggttcgccggaacgc
gagctgtctgggcagatgaccaaagaggcgctagcgaaagccattgccacattgccggaa
aaagagaaattgacggtttcgttatgttattttgaagaaatgaagctgaccgaaatcgcg
gaaattctcggccttagcgtttccagggtgtcgcaattgcattcgaaagcgatgctccgg
ctgcacgcagcgatgctatcggtccatgaacattattaa
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