Planococcus rifietoensis: AUC31_09490
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Entry
AUC31_09490 CDS
T04201
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
prt
Planococcus rifietoensis
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prt03016
]
AUC31_09490
Enzymes [BR:
prt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AUC31_09490
Transfer RNA biogenesis [BR:
prt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AUC31_09490
Prokaryotic type
AUC31_09490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF6093
Motif
Other DBs
NCBI-ProteinID:
ALS75430
UniProt:
A0A0U2Q917
LinkDB
All DBs
Position
3344595..3345332
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AA seq
245 aa
AA seq
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MKRMKATIAYDGSGFAGYQIQLKTRTVQLELLRALKELHKGERVEVVASGRTDSGVHATG
QVVHFDTPFSMPTDSWVRALNVRLPQDIQVYDIEQADADFHARYHAKGKIYRYKWNRSKL
INPFSRNHLVHVPQQIDVARMEKAAQAFIGTHDFSSFCAANTNVVDKVRTIWRIDFEEHG
EELHMVIEGSGFLYNMVRIIAGTLLEVGLNRREPEELADIIAACDRDAAGKTAAAHGLYL
EKVHY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaatgaaagcgacaattgcctatgacggcagcgggtttgcaggctaccaaatc
cagctgaaaacccgcaccgttcaactggagctgttgcgcgcgttgaaagaattgcataaa
ggcgagcgggtcgaagtggtggcgagtggacgtacggattccggggtgcatgccaccggg
caagtggttcatttcgataccccgttctccatgccgacagattcatgggtgcgtgcgctc
aatgtccgcttgccacaggacatccaagtttacgatatcgaacaagcggatgctgatttc
catgcccgctaccacgccaaaggcaagatataccgctataagtggaaccgcagcaaactc
atcaacccgttcagccgcaaccatctcgtccatgtgccgcagcaaatcgatgtggcccgg
atggaaaaagcagcccaagcgtttatcggcacccatgatttttccagtttttgtgcggcg
aacaccaatgtcgtcgataaagtaagaacgatctggcgaattgattttgaagaacatggc
gaggaattgcacatggtcattgaagggtccggttttctctataatatggtgcgcatcata
gcgggcactttgctcgaagtcggattaaatagaagagaaccggaagaactggctgacatc
attgctgcttgtgaccgcgacgctgccggcaaaaccgcagcagcacacggtttatacttg
gaaaaagtgcattactga
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