Planococcus rifietoensis: AUC31_09515
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Entry
AUC31_09515 CDS
T04201
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUC31_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prt03021
]
AUC31_09515
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_09515
Enzymes [BR:
prt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUC31_09515
Transcription machinery [BR:
prt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUC31_09515
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUC31_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Dockerin_1
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ALS75435
UniProt:
A0A0U2Z6D1
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All DBs
Position
3340339..3341283
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AA seq
314 aa
AA seq
DB search
MLEIEKPKIETVEIDSNAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVEEDVASIILNIKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKDGHLRMRMYANRGRGYARADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQLAHFDKLTLDVWTDGSIGPKEAIALGAKIFTEHLNIFVGLTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVHELANKSEDDMMKVRNLGRKSLEEVK
VKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaatagaaaaaccaaaaattgaaacggttgagatcgacagcaatgccaaatat
ggcaaattcgttgttgaaccccttgagcgtggatatggtaccactttaggtaactcctta
cgtcgaatcctactttcatctttacctggcgcagctgttacttcgatccaaattgatggc
gttttgcatgaattctccactgtcgaaggtgtagaagaagatgtagcctctatcattttg
aacatcaagaagctcgcattgaaaatttactctgacgaagaaaaagtcattgaaattgat
gtaaaaggtgacggaacggttacggctgcagatatcactcacgatagtgacgtggaaatt
ctgaatccggatctatatattgcaacaatcgcgaaagacggccacttgcgcatgcgcatg
tatgctaaccgcggccgtggatatgcccgtgcagatcagaacaaacgtgaagatcttccg
attggcgttatcccgattgactctatttacacgccagtttcacgcgtcaatttccaagtg
gaaaatacccgtgtgggccaactcgctcatttcgataaattaaccctcgatgtctggaca
gatggaagcatcggtcccaaagaggcaattgcgcttggcgcgaaaattttcactgaacat
ctgaacatcttcgtaggattaacggatgaggctcaaacagctgaaatcatggttgaaaaa
gaagaagaccaaaaagagaaagtgcttgagatgactatcgaagagcttgatctttctgtt
cgttcttataactgcctgaaacgtgccggcattaacactgtccacgaattggccaacaag
tcggaagacgacatgatgaaagttcgcaacctcggacgcaaatcacttgaagaagtgaaa
gtgaagttggaagatctaggtcttggccttcgtaaagaagactga
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