Planococcus rifietoensis: AUC31_12665
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Entry
AUC31_12665 CDS
T04201
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prt
Planococcus rifietoensis
Pathway
prt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUC31_12665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prt03019
]
AUC31_12665
03400 DNA repair and recombination proteins [BR:
prt03400
]
AUC31_12665
Enzymes [BR:
prt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUC31_12665
Messenger RNA biogenesis [BR:
prt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUC31_12665
DNA repair and recombination proteins [BR:
prt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUC31_12665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ALS75997
UniProt:
A0A0U2YT49
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All DBs
Position
complement(2718637..2720412)
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AA seq
591 aa
AA seq
DB search
MLEQARKLLQSHFGYDSFRTGQEQAITQVFDGQNTICVMPTGGGKSMCYQIPALAMEGTT
IVVSPLISLMKDQVDSLQAAGIPAASINSSLDVYEVREILHEVQMGIIKLLYIAPERLDS
EMFLDGLQGVKVPLIAVDEAHCISQWGHDFRPSYRLISRMLEIFPDNPTVLALTATATPQ
VREDICRILDIEEQNTVITGFERANLSFSVIQGQDRERFIRDYVQKNDNEAGIIYAATRK
TVDSVYESLVKRGVKAAKYHAGMPDDERRLGQERFLNDEVTVMVATNAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLPSECIVLYASQDVQTQRFLIDQAQDPSRIPGELKK
LQGMVDYCHTENCLQQFIVHYFGDGSAAPCGHCGNCVDEREGQDVTEDVQKVLSCVIRMG
QKFGKTMTAQVLTGSRNKKVLDFRFDQLSTYGVLKHMNSKEVSNLIEFMISQELLAVEQG
SFPTIFVPDGGRDVLLGKRRVMRKGAVVTKRIATNDPLFEELRTVRKKLADEAGVPPFVI
FSDKSLQDMVARKPKDDEAFLEVSGVGANKLEKYGEYFLEAIRMYETVNNS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgttggaacaagcaagaaaattactgcagtcgcatttcgggtatgatagcttccggacc
ggccaagagcaggcgatcacacaagttttcgacggccaaaatacgatttgcgtcatgccg
acaggcggcgggaaatcgatgtgctaccagattcctgcgcttgccatggaaggaacgacc
atcgtcgtctcgccgctgatctccctgatgaaagatcaagtcgactctttacaggcagcc
ggaattccagctgcttctattaatagttcgctcgatgtctatgaagtccgtgaaatcctt
catgaagtgcagatgggcatcatcaaattattgtatattgcgccagagcgcctcgattcg
gaaatgtttttggatggcttgcaaggcgtcaaagtgccactcatcgcagtcgatgaagcg
cattgcatctcgcaatggggccacgatttccgtccgagctaccggctgatcagccgcatg
ctggaaattttcccagacaatccgactgttctagccctgaccgcgacagcgacgcctcaa
gtgcgggaagatatttgccgcatcttggatatcgaagaacaaaataccgttatcaccgga
tttgaacgggcgaacttaagtttttcagtcattcaaggacaggaccgtgagcgctttatc
cgtgactacgtccagaaaaacgataacgaggcaggcatcatttacgcagcgacgcgcaaa
acggtggattcggtctatgaatcgctagtcaaacgcggcgtcaaggcagcaaaataccat
gccggcatgccggatgacgaacgccgcctcgggcaagaacgcttcttgaacgatgaagtg
accgtgatggtggcgaccaatgcattcggaatgggcatcgataaatccaatatccgttat
gtgatccattaccagctgccgaaaaacatggaaagctattatcaggaagctgggcgcgca
ggacgagatgggctgccaagtgagtgcatcgtcctgtacgcttctcaggatgtccagacg
cagcgctttttgatcgatcaggcccaggacccttcacgcatcccgggagagttgaagaag
ctccaggggatggtcgactattgccatacggaaaattgcctccagcaatttatcgtccat
tatttcggtgatgggagtgcagcaccgtgcggccattgcggaaactgcgtcgacgaaagg
gaaggtcaggacgtcacggaagatgtccagaaagtgttgtcgtgcgtcatccgcatgggc
cagaaattcggcaagacgatgactgcccaagtattgaccggctcacgcaataaaaaagtg
ctcgacttccgattcgatcaattatcgacatacggcgtgttgaaacacatgaattcaaaa
gaagtatcgaacctcatcgaattcatgatttcacaggaattgctggcagtcgaacaaggc
agctttccgacaatcttcgtcccagatggcgggcgcgatgtgctgcttggaaaacgccgc
gtcatgagaaaaggcgcggttgtcacgaagcgaatcgccaccaacgatccattgttcgag
gaattgcgtacggtccgcaagaaactggcggacgaggcgggagttccgccatttgtcatc
ttctcggataaaagtttgcaggacatggtggcgcgcaaaccaaaagatgacgaagccttc
ttggaagtcagcggtgtcggcgccaacaaactggagaagtacggggaatactttcttgaa
gcgatccggatgtatgaaactgtgaataattcgtag
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integrated database retrieval system
