Planococcus rifietoensis: AUC31_16595
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Entry
AUC31_16595 CDS
T04201
Name
(GenBank) RNA polymerase subunit sigma
KO
K03093
RNA polymerase sigma-I factor
Organism
prt
Planococcus rifietoensis
Brite
KEGG Orthology (KO) [BR:
prt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prt03021
]
AUC31_16595
Transcription machinery [BR:
prt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUC31_16595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ALS76731
UniProt:
A0A0U2ZA11
LinkDB
All DBs
Position
complement(1903138..1903884)
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AA seq
248 aa
AA seq
DB search
MLLTALGGLFGYGAEMPAETLVKLAQQGDEEAEEQLISSHIPFVKKTAAQVCKRFIDDNQ
DEFSIALLAFHEAIRQYRSGHDASFLTFAHMVIRRRVIDHIRKESKRLEFSHDFTASPNE
DHHNHIGDRASSAFFSEQEQIAKRREEIVQFEEMLSEFGLSFQMIAKVSPAHEDARRNAI
QIAQLVAETDEYKDFLLDKKKLPVKHIEELVQVSRKTIERNRKYIIAMSLLMMSDLHYLK
DYLKERLN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctattgactgctttgggcggtttgtttggatatggagcggaaatgcccgctgaaacc
ttggtgaaactcgcacaacaaggcgatgaagaggccgaagagcaattgatttcttcacat
atcccatttgtgaaaaaaaccgccgcacaagtatgcaagcgattcatcgatgacaatcaa
gatgaattcagcattgcgctcttggcatttcatgaagcgatacgccaatatcgttctgga
catgatgcgtcgtttttgacttttgcgcatatggtcatcaggcgcagagtaatcgaccat
attcgtaaagaaagcaaacggctggaattcagccacgatttcacagcttcgccgaatgaa
gaccatcataaccatatcggcgaccgagcatcatcggcttttttttcagaacaggagcag
attgccaaacggcgtgaagagattgtccaattcgaggaaatgctttcagagttcggatta
tctttccaaatgatcgccaaagtttcccctgcacatgaagatgcaaggagaaatgcaatc
caaattgcccaattggtggcggaaacagacgaatacaaggattttttgctcgataagaaa
aaacttccggtcaaacatatcgaggaacttgtccaggtctcgagaaaaaccattgagaga
aaccggaaatacataattgcaatgtcgctattaatgatgagcgacttgcattatttaaaa
gattatttaaaggagcggttgaactga
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