Xylanibacter ruminicola: PRU_0055
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Entry
PRU_0055 CDS
T01212
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pru03009
]
PRU_0055 (rluB)
Enzymes [BR:
pru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PRU_0055 (rluB)
Ribosome biogenesis [BR:
pru03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PRU_0055 (rluB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Prion_octapep
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADE82099
UniProt:
D5EVC4
LinkDB
All DBs
Position
complement(65607..66956)
Genome browser
AA seq
449 aa
AA seq
DB search
MDFENNEKKQEETAQDGYQKEYRPGRSPRPRIHTAARPVYERPSYRNNNDEGEFRPEGFG
AGLQSNAPQRPQGGYRPRNNYNNDGGYGQQRQGGYGQRPQGGYGRPQQGGYGRPQQGGYG
QRPQGGGYGQRPQQGGYGRPQQGGYGRPQQGGYGRPQQGGYGRPQQGGYGKPYGAAPYKK
GPRQRTADYDPNAKYSMKKRIEYKEINYDPNEPLRLNKFLANAGVCSRREADEFIQAGVV
SVNGEIVTELGTKILRTDVVKFHDQPVNIEKKVYVLLNKPKDYVTTSDDPQQRKTVMDLV
KNACPERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKYLKKKIYHVYLDKNVTAHDLAQ
IAEGIQLEDGEIKADDVQYAHPTDKKQVGIEIHSGKNRIVRRIFESLGYRVQKLDRVQFA
GLTKKNLKRGDWRYLTEEEVDRLRMGAYE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgaaaacaacgagaaaaaacaggaagagactgcacaggacggatatcagaag
gagtatcgtccaggtcgttcaccacgtccacgcattcataccgctgcgcgcccagtatat
gagcgtcccagctatcgcaataacaacgacgaaggcgagttccgcccagagggattcggc
gcaggtttgcagagcaatgcacctcagcgtcctcagggaggctatcgtccacgtaacaac
tacaataacgatggtggctacggtcagcagcgtcagggtggttatggccagcgcccacag
ggtggctacggtcgtcctcagcagggcggttacggtcgtccccagcagggtggctacggc
cagcgtccacagggtggcggttatggccagcgtcctcagcagggtggctacggtcgtcct
cagcagggtggttacggtcgtccccagcagggtggctacggtcgtcctcagcagggtggc
tacggtcgtcctcagcagggtggctatggcaagccttacggagcagctccttataagaag
ggtccacgtcagcgcacagccgactacgatccaaatgcaaagtactctatgaagaagcgc
atcgagtacaaggagattaactacgatccaaacgagccactgcgtttgaacaagttcctg
gctaatgctggtgtttgcagccgtcgcgaggccgacgagttcatccaggcaggtgtagta
tcggttaacggcgagattgtaaccgagctgggaacaaagatcctgcgtaccgatgttgtt
aagttccacgatcagcccgtaaacatcgagaagaaggtttacgtactgctcaacaagcca
aaggactacgttactaccagcgacgatcctcagcagcgtaagactgtaatggacctcgtt
aagaacgcttgtcctgagcgtatctaccccgtaggtcgtctcgaccgcaacaccactggt
gtgctgctgctcaccaacgatggcgatctggcttctaagcttacacatcctaagtacctg
aagaagaagatttatcacgtttacctcgataagaacgttaccgctcacgacctggcacag
attgccgagggcatccagcttgaggatggtgagattaaggccgacgacgttcagtatgct
catcctaccgataagaagcaggttggcatcgagattcactcaggtaagaaccgtatcgtt
cgccgtatcttcgagagcctgggctaccgtgttcagaagctcgaccgcgtacagttcgct
ggtctgactaagaagaacctgaagcgtggcgactggcgctacctgaccgaggaggaggtt
gaccgcctgcgtatgggagcttatgagtaa
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