Xylanibacter ruminicola: PRU_0131
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Entry
PRU_0131 CDS
T01212
Name
(GenBank) alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00300
Lysine biosynthesis
pru00470
D-Amino acid metabolism
pru00550
Peptidoglycan biosynthesis
pru01100
Metabolic pathways
pru01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PRU_0131
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PRU_0131
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PRU_0131
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PRU_0131
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pru01011
]
PRU_0131
Enzymes [BR:
pru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PRU_0131
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PRU_0131
Peptidoglycan biosynthesis and degradation proteins [BR:
pru01011
]
Precursor biosynthesis
Amino acid ligase
PRU_0131
Racemase
PRU_0131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ADE81691
UniProt:
D5EVJ7
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All DBs
Position
165638..168016
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AA seq
792 aa
AA seq
DB search
MLTDSRSLCFPEETLFFALKTQRNDGHRYIQDLYNRGVRQFVVEQVPEAYETLYPQANFL
RVPHTLAALQRLAERHRDEFSLPIVGITGSNGKTMVKEWLYQLLLPSQRIVRSPRSYNSQ
IGVPLSVWLLNEQTEVGIFEAGISQPGEMMALRDIIQPTIGVLTSLGAAHQENFRSMEEK
CMEKLELMHDTEAMVYCSDNDIVSRCIRRMNYKGEKISWSTCDQQAAFYVKSVENSHITY
IWKEEENCFDIPFIDEASIEDCITCAAVALRLGLTPGDLADRMPKLEPVAMRLEVKEGQR
GCILINDSYNSDINSLDIALDFMNRREELKKRTLILSDMFQSGLSPEKLYAQVSELAVKR
GITKFIGIGAQLTAQADKIQIADKQFFADVNHFLGSDAFTGLRNEMILLKGARPFGFDQI
TEQLEQKVHETILEVNLNAVVENLNYYRSFMKPETKMVCMIKADAYGAGAVEIAKTLQDH
RVDYLAVAVADEGVTLRKAGITANIMIMNPEMTAFKTMFDYDLEPEVYSFRLLDALIKAA
RKEGITGWPVHIKLDTGMHRLGFDPEQDMDELIDRLTHQQAVIPRSVFSHFVGSDSDDFD
NFSTLQFKRFEMGSQKLQAAFSHKILRHIDNSAGIEHFPDRQLDMCRLGLGLYGIDSRDN
RILHTVSTLKTTILQMHQVPKSETVGYSRKGKLTRDSVIAAIPIGYADGLNRRLGNRHCY
CLVNGQKAEYVGNICMDVALIDVTDIPCQEGDQVEIFGEHLPVTVLSDVLETIPYEVLTG
ISNRVKRVYFQD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaccgatagccgtagtctttgtttccccgaagaaacattgtttttcgccctgaaa
acacagcgtaacgatggtcatcgttacattcaggacttgtataaccgtggtgtgcgtcag
ttcgtagtcgaacaggtgcccgaggcttacgaaaccctttatccgcaggccaactttttg
cgagtgcctcacacattggcagccctgcagcgtttggccgagcgccatcgcgacgagttc
tcgctgcccatcgtaggtatcaccggctctaacggtaaaaccatggtcaaggagtggctt
tatcagttgctgttgccctcgcagcgtattgtacgttcgcctcgcagctacaactcacag
ataggtgtgcccctctcggtatggttgctcaacgagcagaccgaggttggaatcttcgag
gctggtatctcgcagccaggcgagatgatggccctgcgtgatatcatccagcccaccatc
ggcgtgctcacctcgttaggtgccgcccatcaggagaatttccgttcgatggaagagaag
tgcatggagaaactcgagctgatgcacgataccgaggccatggtatattgctctgataac
gatatcgtgagccgttgcatccgtcgcatgaactataaaggcgagaaaatctcgtggagc
acctgcgatcagcaggccgccttctatgttaagagtgtcgagaactcgcacatcacctat
atttggaaggaagaggagaactgcttcgatatcccatttatcgacgaggcctcaatcgag
gattgtatcacctgtgcagccgtagccttgcgcttgggtcttacccctggcgatctggcc
gaccgcatgcctaagctcgaacccgtggccatgcgcctcgaggttaaagaaggccagcgt
ggttgcatcctcatcaacgactcgtacaactctgatatcaactcactcgatatcgccctc
gatttcatgaatcgccgcgaggagttgaagaagcgtacccttatccttagcgatatgttc
cagtcgggtctttcgcccgaaaaactctacgcccaggtatccgagttggctgttaagcgt
ggcatcaccaagtttattggtatcggcgcccagctcactgcccaggccgataaaatccag
attgccgacaagcagttctttgccgatgtaaaccacttcctgggtagcgatgcctttacc
ggtttgcgcaacgagatgattctcttgaagggtgcccgtcctttcggtttcgatcagatt
accgagcagctcgagcagaaggttcacgaaaccatcctcgaggtcaacctcaatgccgtg
gtcgagaatctcaactactatcgctcgttcatgaagcccgaaaccaagatggtgtgcatg
atcaaggccgatgcctatggagcaggagccgtcgagatagctaagaccctgcaggatcac
cgtgttgactacctcgcagtggcagtggccgacgagggtgttaccctccgtaaggctggc
atcaccgccaatatcatgattatgaaccccgagatgaccgccttcaagaccatgttcgat
tacgacctggagcccgaggtatatagcttccgcttgctcgatgccctcatcaaggcagcc
cgcaaggagggtatcaccggctggcctgtacatatcaagctcgatacaggtatgcaccgc
ttaggcttcgatcccgagcaggatatggatgagcttatcgatcgcctcacccatcagcag
gctgttattccccgttccgtattcagtcatttcgttggttccgacagcgacgatttcgat
aatttctcaaccttgcagttcaagcgtttcgagatgggcagtcagaaacttcaggccgcc
ttctcgcacaagattctgcgccatatcgacaactctgccggcatcgagcacttccccgat
cgccagttggatatgtgtcgtttgggtcttggcctgtatggtatcgattcgcgcgacaac
cgcattctccataccgtcagcaccctcaagaccaccattctgcagatgcaccaagtgccc
aagagcgaaaccgtgggctacagtcgcaagggcaagctgactcgcgattctgtcatcgct
gccatacctattggctatgccgatggcttgaaccgtcgtttgggcaatcgccactgctac
tgtctggtcaacggtcagaaagctgagtatgtgggtaatatctgtatggatgtggccctg
attgatgtcaccgacatcccctgtcaggagggcgaccaggtagagatctttggcgagcac
ctgcccgttaccgtgctcagcgatgtgctcgaaaccatcccctatgaggtcctcaccggc
atcagcaaccgtgtaaaacgcgtttatttccaggattaa
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