Xylanibacter ruminicola: PRU_0168
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Entry
PRU_0168 CDS
T01212
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PRU_0168 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_0168 (xseA)
Enzymes [BR:
pru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PRU_0168 (xseA)
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PRU_0168 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
DUF7239
HTH_22
Motif
Other DBs
NCBI-ProteinID:
ADE81202
UniProt:
D5EW11
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All DBs
Position
complement(210556..211791)
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AA seq
411 aa
AA seq
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MNTERHITLFELNRLVREAIEDALPMEYWVEAELSECRESRGHCYMELIQKDEQTATPIA
KASAKCWANKWLTIRPYFERTTGQQLHAGMKVLLQVYPQFHEAYGFSWIVTDIDPTYTLG
DMARKRQEIIQKLKAEGVFDLQKELQLPVFCQRIAVISSQTAAGYGDFCNQLADNPYGFK
FETQLFPAIMQGEGVEQSIISALEQIYDMPFDCVVIIRGGGATSDMSGFDTLALAENVAN
FPIPIITGIGHERDESILDMISHTRVKTPTAAAALLIDHLKGVLETIEGAQSMITHYVQQ
KFSIANSQLSIISEAIPRLFSIVKTRQEAKIDALYTRLPMLIERRFTSERHRLQLMDEKL
KALDPTLLLARGYSITMHNGRAVKDASQLPPGAEIETRLAKGTIHSVIKSV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacagagcgccatatcacattattcgagcttaaccgcttggtacgcgaggctatc
gaggatgctttgcccatggaatactgggtagaagccgaactcagcgagtgccgcgaatca
cgtggtcattgttatatggagcttattcagaaggatgaacaaaccgccacacctatcgcc
aaagcctcagccaaatgctgggccaacaagtggctcaccatccgtccttacttcgagcgc
actaccggtcaacaactgcatgccggtatgaaagtgctgctacaggtttacccgcagttt
cacgaggcttacggtttctcgtggatcgtgaccgacatcgaccccacctacaccttaggc
gatatggcccgcaagcgtcaggaaatcatccagaagcttaaggccgagggcgtgttcgac
ctgcaaaaggaactacagttacccgttttctgccagcgtattgccgttatctcatcgcaa
acagccgctggctacggcgatttctgcaaccaactggctgataacccttacggctttaaa
ttcgagacacagctctttcctgctatcatgcagggcgagggcgttgaacagagcatcatc
agtgctctggagcagatttacgatatgccatttgattgcgtagtgattatccgtggtggt
ggtgctaccagcgatatgagcggtttcgacaccttggctttggccgaaaatgtggccaac
ttcccaatacctatcataacaggtatcggccatgagcgcgacgagagcatactcgatatg
atatcgcacacccgcgtaaaaacacccacagctgcagccgccttgctcatcgaccacctg
aagggcgtactcgaaaccatcgaaggagcccagagcatgattacgcactacgttcagcaa
aaattttcaattgccaattctcaattgtcaattatatccgaggctatcccccgattgttc
tcgattgtaaaaacccgacaggaggctaagattgatgccctctatacccgcctgccaatg
ttgatagagcgccgattcacatcagagagacatcgtctgcaactgatggacgagaaactc
aaagccctcgacccaaccctgttgctggctcgcggctacagcatcactatgcataacggc
cgggccgtaaaagacgcatcgcagctgccccccggcgccgaaatcgagacccgcctagcc
aagggtaccattcactcagtaattaaatccgtataa
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