Xylanibacter ruminicola: PRU_0208
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Entry
PRU_0208 CDS
T01212
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pru02000
]
PRU_0208
Transporters [BR:
pru02000
]
Other transporters
Pores ion channels [TC:
1
]
PRU_0208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
3keto-disac_hyd
Laminin_G_3
DUF748
Trp_DMAT
SepF
Motif
Other DBs
NCBI-ProteinID:
ADE83199
UniProt:
D5EW45
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All DBs
Position
248989..250113
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AA seq
374 aa
AA seq
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MDAVLDGKKSEKTSKAKKQAEDAAEAVDDTPDAVGQNQKSDFVRGSVILFQDDFANEQMG
EFPSKWDVSDGSLETASINGKKYAHSNAPDSRFSPLMENMKSYLPDVFTLEWDEFFCKAG
DIPDFPFEFQFLDASGNQTGHIYLRYRPGNPDCYGNYTFKKGGGIDQNVGGSMDWDHLKQ
YTKVGQWNHFAISFNKRAFKFYLNGTRIINLPNVAAPARFEFIIQDENPYRGVANVVLAK
GAVELYQRQTTDLSAVEKAIAETGKFVTNNILFETGKATLKPESMEEIQKVADYMKKNPS
VRFEVQGHTDNQGSDKINDPLSQQRAEAVVKALAQLGCDEFNLRAVGKGSHEPVADNKTD
AGRAQNRRVEFIKK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgctcgacggtaaaaaatccgagaaaacatcgaaagctaaaaagcaagcc
gaggatgcagccgaagcggtcgacgacacccccgatgccgtaggtcagaaccagaagagc
gactttgttcgtggtagcgtcattctgttccaggacgactttgctaacgagcagatgggt
gagttcccttcaaaatgggatgtcagtgatggtagcttggagacagcctctattaatggt
aagaagtatgcgcacagtaatgcccccgactcacgattctcgccgctgatggagaatatg
aagtcgtacctgcccgatgtgttcaccctcgagtgggatgagttcttctgtaaggctggc
gatatccccgatttccccttcgagttccagttccttgatgcaagtggcaaccagacgggc
catatatatctgcgctatcgcccaggcaatcccgattgttatggcaactatacctttaag
aagggtggtggtatcgatcagaatgttggtggcagcatggattgggatcatttaaagcaa
tacaccaaggttggtcagtggaatcatttcgccatctcgttcaacaagcgtgcttttaag
ttctacctcaatggcacgcgcatcatcaatctgcctaatgtagcagcccctgctcgtttc
gagttcattatccaggacgagaatccctatcgtggcgttgccaatgtggtgcttgccaag
ggtgcagtagagctctatcagcgccagactaccgatctctcagctgtagagaaagccatc
gccgagacgggtaagttcgtcaccaataatatcctgttcgaaacgggcaaggctaccctg
aagcccgagtcgatggaggaaattcagaaggtggccgactatatgaagaagaaccccagt
gtgcgtttcgaggtgcagggccataccgataatcagggctccgataaaatcaacgatccc
ctttcgcagcagcgtgccgaggccgttgttaaggcactcgctcagttaggttgcgacgag
ttcaacctccgtgccgtaggcaaaggcagtcacgaacccgtagccgataacaagaccgat
gccggccgcgcccagaaccgccgtgtggagtttattaagaaataa
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